ENSDARG00000037794


Danio rerio

Features
Gene ID: ENSDARG00000037794
  
Biological name :nptx2a
  
Synonyms : neuronal pentraxin 2a / nptx2a
  
Possible biological names infered from orthology : neuronal pentraxin 2 / NPTX2 / O70340 / P47972
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 61566374
Gene end: 61593274
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129257
Ensembl peptide - ENSDARP00000144328
Ensembl peptide - ENSDARP00000055070
Ensembl peptide - ENSDARP00000127578
NCBI entrez gene - 553230     See in Manteia.
RefSeq - NM_001109768
RefSeq Peptide - NP_001103238
swissprot - D2D0C1
swissprot - X1WBI7
swissprot - X1WGA2
ZFIN ID - ZDB-GENE-060707-1
Ensembl - ENSDARG00000037794
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NPTX2ENSGALG00000003562Gallus gallus
 NPTX2ENSG00000106236Homo sapiens
 Nptx2ENSMUSG00000059991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nptx2b / neuronal pentraxin IIb / NPTX2* / O70340* / P47972* / neuronal pentraxin 2*ENSDARG0000004516472
nptx1l / neuronal pentraxin 1 like / NPTX1* / Q15818* / neuronal pentraxin 1*ENSDARG0000007467152
si:dkey-283b15.2ENSDARG0000004138246
si:dkey-14o18.2ENSDARG0000006299545
nptxrb / neuronal pentraxin receptor bENSDARG0000005337542
nptxra / neuronal pentraxin receptor aENSDARG0000004043040
ptx4 / pentraxin 4, long / Q96A99* / pentraxin 4* / pentraxin-4 isoform 2 *ENSDARG0000003807220
ptx3a / pentraxin 3, long a / PTX3* / P48759* / P26022* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSDARG0000006827517
ptx3b / pentraxin 3, long b / PTX3* / P48759* / P26022* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSDARG0000007951515
crp2 / crp3 / C-reactive protein 2ENSDARG0000004261314
crp1 / C-reactive protein 1ENSDARG0000007145414
crp7 / C-reactive protein 7ENSDARG0000007145613
crp6 / C-reactive protein 6ENSDARG0000007145713
crp2 / C-reactive protein 2ENSDARG0000005646213
crp / crp2 / c-reactive protein, pentraxin-relatedENSDARG0000005649813
si:ch211-270n8.1 / CRP* / APCS* / Mptx2* / Mptx1* / P12246* / P14847* / P02741* / P02743* / C-reactive protein* / mucosal pentraxin 2* / serum amyloid P-component* / amyloid P component, serum*ENSDARG0000004508911
si:ch211-234p6.9ENSDARG000000957306


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR030476  Pentaxin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051966 regulation of synaptic transmission, glutamatergic IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord motor neuron has fewer parts of type motor neuron synapse, abnormal
Show

 ZFA:0001480 dorsal anterior lateral line nerve dorsal anterior lateral line nerve has fewer parts of type dorsal anterior lateral line nerve synapse, abnormal
dorsal anterior lateral line nerve synapse assembly decreased process quality , abnormal
Show

 ZFA:0009052 motor neuron motor neuron synapse assembly decreased process quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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