ENSDARG00000056498


Danio rerio

Features
Gene ID: ENSDARG00000056498
  
Biological name :crp
  
Synonyms : c-reactive protein, pentraxin-related / crp / crp2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 38109799
Gene end: 38113208
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073460
Ensembl peptide - ENSDARP00000113177
swissprot - A3KPH8
swissprot - F1QXE4
ZFIN ID - ZDB-GENE-030131-5826
ZFIN ID - ZDB-GENE-060901-6
Ensembl - ENSDARG00000056498
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
crp2 / C-reactive protein 2ENSDARG0000005646278
crp2 / crp3 / C-reactive protein 2ENSDARG0000004261373
crp6 / C-reactive protein 6ENSDARG0000007145768
crp7 / C-reactive protein 7ENSDARG0000007145667
crp1 / C-reactive protein 1ENSDARG0000007145460
si:ch211-234p6.9ENSDARG0000009573036
nptxrb / neuronal pentraxin receptor bENSDARG0000005337526
nptx1l / neuronal pentraxin 1 like / NPTX1* / Q15818* / neuronal pentraxin 1*ENSDARG0000007467126
nptxra / neuronal pentraxin receptor aENSDARG0000004043025
nptx2a / neuronal pentraxin 2a / NPTX2* / P47972* / neuronal pentraxin 2*ENSDARG0000003779425
si:dkey-14o18.2ENSDARG0000006299525
si:dkey-283b15.2ENSDARG0000004138224
ptx3b / pentraxin 3, long b / PTX3* / P48759* / P26022* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSDARG0000007951524
si:ch211-270n8.1 / CRP* / APCS* / Mptx2* / Mptx1* / P12246* / P14847* / P02741* / P02743* / C-reactive protein* / mucosal pentraxin 2* / serum amyloid P-component* / amyloid P component, serum*ENSDARG0000004508924
nptx2b / neuronal pentraxin IIb / NPTX2* / O70340* / P47972* / neuronal pentraxin 2*ENSDARG0000004516424
ptx3a / pentraxin 3, long a / PTX3* / P48759* / P26022* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSDARG0000006827522
ptx4 / pentraxin 4, long / Q96A99* / pentraxin 4* / pentraxin-4 isoform 2 *ENSDARG0000003807221


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0009617 response to bacterium IDA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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