ENSDARG00000068275


Danio rerio

Features
Gene ID: ENSDARG00000068275
  
Biological name :ptx3a
  
Synonyms : pentraxin 3, long a / ptx3a
  
Possible biological names infered from orthology : P26022 / P48759 / pentraxin 3 / Pentraxin-related protein PTX3 / PTX3
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 41364437
Gene end: 41375120
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000089444
NCBI entrez gene - 101887125     See in Manteia.
swissprot - A3KPN4
ZFIN ID - ZDB-GENE-030131-8720
Ensembl - ENSDARG00000068275
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTX3ENSGALG00000028284Gallus gallus
 PTX3ENSG00000163661Homo sapiens
 Ptx3ENSMUSG00000027832Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptx3b / pentraxin 3, long b / PTX3* / P48759* / P26022* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSDARG0000007951537
si:dkey-283b15.2ENSDARG0000004138218
nptxra / neuronal pentraxin receptor aENSDARG0000004043017
si:dkey-14o18.2ENSDARG0000006299517
nptxrb / neuronal pentraxin receptor bENSDARG0000005337517
nptx1l / neuronal pentraxin 1 like / NPTX1* / Q15818* / neuronal pentraxin 1*ENSDARG0000007467117
nptx2a / neuronal pentraxin 2a / NPTX2* / P47972* / neuronal pentraxin 2*ENSDARG0000003779417
nptx2b / neuronal pentraxin IIb / NPTX2* / O70340* / P47972* / neuronal pentraxin 2*ENSDARG0000004516416
crp1 / C-reactive protein 1ENSDARG0000007145414
ptx4 / pentraxin 4, long / Q96A99* / pentraxin 4* / pentraxin-4 isoform 2 *ENSDARG0000003807214
crp7 / C-reactive protein 7ENSDARG0000007145613
crp2 / C-reactive protein 2ENSDARG0000005646213
crp2 / crp3 / C-reactive protein 2ENSDARG0000004261312
crp6 / C-reactive protein 6ENSDARG0000007145712
crp / crp2 / c-reactive protein, pentraxin-relatedENSDARG0000005649811
si:ch211-270n8.1 / CRP* / APCS* / Mptx2* / Mptx1* / P12246* / P14847* / P02741* / P02743* / C-reactive protein* / mucosal pentraxin 2* / serum amyloid P-component* / amyloid P component, serum*ENSDARG0000004508910
si:ch211-234p6.9ENSDARG000000957306


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR030476  Pentaxin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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