ENSG00000106236


Homo sapiens

Features
Gene ID: ENSG00000106236
  
Biological name :NPTX2
  
Synonyms : neuronal pentraxin 2 / NPTX2 / P47972
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q22.1
Gene start: 98617297
Gene end: 98629868
  
Corresponding Affymetrix probe sets: 213479_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000265634
NCBI entrez gene - 4885     See in Manteia.
OMIM - 600750
RefSeq - NM_002523
RefSeq Peptide - NP_002514
swissprot - P47972
Ensembl - ENSG00000106236
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nptx2aENSDARG00000037794Danio rerio
 nptx2bENSDARG00000045164Danio rerio
 NPTX2ENSGALG00000003562Gallus gallus
 Nptx2ENSMUSG00000059991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NPTX1 / Q15818 / neuronal pentraxin 1ENSG0000017124655
NPTXR / O95502 / neuronal pentraxin receptorENSG0000022189048
PTX4 / Q96A99 / pentraxin 4ENSG0000025169224
PTX3 / P26022 / pentraxin 3ENSG0000016366120
CRP / P02741 / C-reactive proteinENSG0000013269313
APCS / P02743 / amyloid P component, serumENSG0000013270313


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR030476  Pentaxin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007268 chemical synaptic transmission NAS
 biological_processGO:0008306 associative learning IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr