ENSG00000171246


Homo sapiens

Features
Gene ID: ENSG00000171246
  
Biological name :NPTX1
  
Synonyms : neuronal pentraxin 1 / NPTX1 / Q15818
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q25.3
Gene start: 80467148
Gene end: 80477843
  
Corresponding Affymetrix probe sets: 204684_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000307549
NCBI entrez gene - 4884     See in Manteia.
OMIM - 602367
RefSeq - NM_002522
RefSeq Peptide - NP_002513
swissprot - Q15818
Ensembl - ENSG00000171246
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nptx1lENSDARG00000074671Danio rerio
 NPTX1ENSGALG00000017418Gallus gallus
 Nptx1ENSMUSG00000025582Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NPTX2 / P47972 / neuronal pentraxin 2ENSG0000010623655
NPTXR / O95502 / neuronal pentraxin receptorENSG0000022189046
PTX4 / Q96A99 / pentraxin 4ENSG0000025169223
PTX3 / P26022 / pentraxin 3ENSG0000016366118
APCS / P02743 / amyloid P component, serumENSG0000013270314
CRP / P02741 / C-reactive proteinENSG0000013269313


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR030476  Pentaxin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007268 chemical synaptic transmission TAS
 biological_processGO:0007417 central nervous system development TAS
 biological_processGO:0060385 axonogenesis involved in innervation IEA
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr