ENSMUSG00000025582


Mus musculus

Features
Gene ID: ENSMUSG00000025582
  
Biological name :Nptx1
  
Synonyms : neuronal pentraxin 1 / Nptx1 / Q62443
  
Possible biological names infered from orthology : Q15818
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: E2
Gene start: 119538719
Gene end: 119547753
  
Corresponding Affymetrix probe sets: 10393662 (MoGene1.0st)   1422130_at (Mouse Genome 430 2.0 Array)   1434877_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000026670
NCBI entrez gene - 18164     See in Manteia.
MGI - MGI:107811
RefSeq - NM_008730
RefSeq Peptide - NP_032756
swissprot - A2ACL9
swissprot - Q62443
Ensembl - ENSMUSG00000025582
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nptx1lENSDARG00000074671Danio rerio
 NPTX1ENSGALG00000017418Gallus gallus
 NPTX1ENSG00000171246Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Nptx2 / O70340 / Neuronal pentraxin-2 / P47972*ENSMUSG0000005999155
Nptxr / neuronal pentraxin receptor / O95502*ENSMUSG0000002242146
Npcd / NPTXR* / O95502* / neuronal pentraxin receptor*ENSMUSG0000008983736
Ptx4 / pentraxin-4 isoform 2 / Q96A99* / pentraxin 4*ENSMUSG0000004417222
Ptx3 / P48759 / Pentraxin-related protein PTX3 / P26022* / pentraxin 3*ENSMUSG0000002783217
Apcs / P12246 / serum amyloid P-component / P02743* / amyloid P component, serum*ENSMUSG0000002654214
Mptx1ENSMUSG0000002653113
Crp / P14847 / C-reactive protein / P02741*ENSMUSG0000003794212
Mptx2 / mucosal pentraxin 2ENSMUSG0000007918012


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR030476  Pentaxin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060385 axonogenesis involved in innervation IGI
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002184 abnormal innervation "the malformation, misprojection or malfunction of the connection of nerve fibers with a target" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Nme1tm1Jyd/Nme1tm1Jyd
Genetic Background: 129-Nme1tm1Jyd

Allelic Composition: Nptx1tm1Mspn/Nptx1tm1Mspn,Nptx2tm1Mspn/Nptx2tm1Mspn
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6

Allelic Composition: Nptx1tm1Mspn/Nptx1tm1Mspn,Nptx2tm1Mspn/Nptx2tm1Mspn,Nptxrtm1Mspn/Nptxrtm1Mspn
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6

 MP:0005551 abnormal eye electrophysiology "abnormal function of the eye as determined through electrophysiological recordings from single cells or summary recordings from multiple cells (e.g. electroretinogram)" [NMF:Stephanie Pretel, Neuroscience Mutagenesis Facility Curator]
Show

Allelic Composition: Nptx1tm1Mspn/Nptx1tm1Mspn,Nptx2tm1Mspn/Nptx2tm1Mspn
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr