ENSGALG00000003916


Gallus gallus

Features
Gene ID: ENSGALG00000003916
  
Biological name :SIAH1
  
Synonyms : SIAH1 / siah E3 ubiquitin protein ligase 1
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase SIAH1A / P61092 / Q8IUQ4 / Siah1a / Siah1b / siah E3 ubiquitin protein ligase 1B
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 7479956
Gene end: 7497883
  
Corresponding Affymetrix probe sets: Gga.2757.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000063940
Ensembl peptide - ENSGALP00000006226
Ensembl peptide - ENSGALP00000045588
NCBI entrez gene - 374076     See in Manteia.
RefSeq - XM_015292419
RefSeq - XM_015292417
RefSeq - XM_015292418
RefSeq - XM_015292411
RefSeq - XM_015292412
RefSeq - XM_015292413
RefSeq - XM_015292415
RefSeq - XM_015292416
swissprot - F1P2G0
swissprot - A0A1L1RYL2
Ensembl - ENSGALG00000003916
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 siah1ENSDARG00000030871Danio rerio
 SIAH1ENSG00000196470Homo sapiens
 P61092ENSMUSG00000036840Mus musculus
 Siah1bENSMUSG00000040749Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SIAH2 / siah E3 ubiquitin protein ligase 2 / O43255* / Q06986*ENSGALG0000001039577
SIAH3 / siah E3 ubiquitin protein ligase family member 3 / Q8IW03*ENSGALG0000002684938


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR004162  E3 ubiquitin-protein ligase SIN-like
 IPR008974  TRAF-like
 IPR013010  Zinc finger, SIAH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018121  Seven-in-absentia protein, TRAF-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030163 protein catabolic process IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:2001244 positive regulation of intrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0030877 beta-catenin destruction complex IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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