ENSGALG00000004215


Gallus gallus

Features
Gene ID: ENSGALG00000004215
  
Biological name :WIPI1
  
Synonyms : WD repeat domain, phosphoinositide interacting 1 / WIPI1
  
Possible biological names infered from orthology : Q5MNZ9 / Q8R3E3
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 7900008
Gene end: 7918509
  
Corresponding Affymetrix probe sets: Gga.3352.1.S1_at (Chicken Array)   Gga.9586.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006690
Ensembl peptide - ENSGALP00000059873
Ensembl peptide - ENSGALP00000054533
Ensembl peptide - ENSGALP00000044590
NCBI entrez gene - 417437     See in Manteia.
RefSeq - XM_015279954
RefSeq - XM_015279955
swissprot - A0A1L1RM65
swissprot - A0A1D5PNT9
swissprot - A0A1D5NW54
swissprot - F1P1I7
Ensembl - ENSGALG00000004215
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wipi1ENSDARG00000040657Danio rerio
 WIPI1ENSG00000070540Homo sapiens
 Wipi1ENSMUSG00000041895Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
WIPI2 / Q5ZHN3 / WD repeat domain phosphoinositide-interacting protein 2 / Q9Y4P8* / Q80W47* / WD repeat domain, phosphoinositide interacting 2*ENSGALG0000000455748


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR032909  WD repeat domain phosphoinositide-interacting protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006497 protein lipidation IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0034497 protein localization to phagophore assembly site IBA
 biological_processGO:0044804 autophagy of nucleus IBA
 biological_processGO:0048203 vesicle targeting, trans-Golgi to endosome IEA
 cellular_componentGO:0000407 phagophore assembly site IEA
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0034045 phagophore assembly site membrane IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0030331 estrogen receptor binding IEA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding IEA
 molecular_functionGO:0050681 androgen receptor binding IEA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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