ENSGALG00000004557


Gallus gallus

Features
Gene ID: ENSGALG00000004557
  
Biological name :WIPI2
  
Synonyms : Q5ZHN3 / WD repeat domain phosphoinositide-interacting protein 2 / WIPI2
  
Possible biological names infered from orthology : Q80W47 / Q9Y4P8 / WD repeat domain, phosphoinositide interacting 2
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 4061533
Gene end: 4082360
  
Corresponding Affymetrix probe sets: Gga.17346.1.S1_s_at (Chicken Array)   GgaAffx.13204.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007240
Ensembl peptide - ENSGALP00000062260
Ensembl peptide - ENSGALP00000060954
Ensembl peptide - ENSGALP00000059438
NCBI entrez gene - 416481     See in Manteia.
RefSeq - NM_001006162
RefSeq - XM_015294164
RefSeq Peptide - NP_001006162
swissprot - A0A1L1RL00
swissprot - A0A1L1RTW8
swissprot - Q5ZHN3
swissprot - A0A1L1RQ76
Ensembl - ENSGALG00000004557
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wipi2ENSDARG00000037871Danio rerio
 WIPI2ENSG00000157954Homo sapiens
 Wipi2ENSMUSG00000029578Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
WIPI1 / WD repeat domain, phosphoinositide interacting 1 / Q5MNZ9* / Q8R3E3*ENSGALG0000000421556


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR032911  WD repeat domain phosphoinositide-interacting protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006497 protein lipidation IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0034497 protein localization to phagophore assembly site IEA
 biological_processGO:0044804 autophagy of nucleus IBA
 biological_processGO:0061739 protein lipidation involved in autophagosome assembly IEA
 biological_processGO:0098792 xenophagy IEA
 cellular_componentGO:0000407 phagophore assembly site IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0034045 phagophore assembly site membrane IBA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding IEA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001619 ATG16L1 / autophagy related 16 like 1 / Q676U5* / Q8C0J2* / autophagy related 16-like 1 (S. cerevisiae)*  / complex / reaction
 ENSGALG00000002345 ATG12 / autophagy related 12 / O94817* / Q9CQY1* / Ubiquitin-like protein ATG12 *  / complex / reaction






 

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