ENSDARG00000037871


Danio rerio

Features
Gene ID: ENSDARG00000037871
  
Biological name :wipi2
  
Synonyms : WD repeat domain, phosphoinositide interacting 2 / wipi2
  
Possible biological names infered from orthology : Q80W47 / Q9Y4P8
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 40821657
Gene end: 40837218
  
Corresponding Affymetrix probe sets: Dr.2812.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116127
Ensembl peptide - ENSDARP00000118552
NCBI entrez gene - 437002     See in Manteia.
swissprot - F1QLJ9
swissprot - F1R5J1
ZFIN ID - ZDB-GENE-040718-488
Ensembl - ENSDARG00000037871
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WIPI2ENSGALG00000004557Gallus gallus
 WIPI2ENSG00000157954Homo sapiens
 Wipi2ENSMUSG00000029578Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wipi1 / WD repeat domain, phosphoinositide interacting 1 / Q5MNZ9*ENSDARG0000004065758


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR032911  WD repeat domain phosphoinositide-interacting protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0006914 autophagy IEA
 cellular_componentGO:0000407 phagophore assembly site IEA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding IEA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000023396 atg5 / ATG5 autophagy related 5 homolog (S. cerevisiae) / Q99J83* / Q9H1Y0* / autophagy related 5* / Autophagy protein 5 *  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr