ENSGALG00000004236


Gallus gallus

Features
Gene ID: ENSGALG00000004236
  
Biological name :TRAF3IP1
  
Synonyms : TRAF3 interacting protein 1 / TRAF3IP1
  
Possible biological names infered from orthology : Q149C2 / Q8TDR0
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 5913126
Gene end: 5949660
  
Corresponding Affymetrix probe sets: Gga.12733.1.S1_a_at (Chicken Array)   GgaAffx.2635.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006730
NCBI entrez gene - 424029     See in Manteia.
RefSeq - XM_003641562
RefSeq - XM_015289247
RefSeq - XM_004942511
RefSeq - XM_004942512
swissprot - E1BRS6
Ensembl - ENSGALG00000004236
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 traf3ip1ENSDARG00000010300Danio rerio
 Q8TDR0ENSG00000204104Homo sapiens
 Q149C2ENSMUSG00000034292Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018799  TRAF3-interacting protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001738 morphogenesis of a polarized epithelium IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0001933 negative regulation of protein phosphorylation IEA
 biological_processGO:0021532 neural tube patterning IEA
 biological_processGO:0031076 embryonic camera-type eye development IEA
 biological_processGO:0031333 negative regulation of protein complex assembly IEA
 biological_processGO:0032480 negative regulation of type I interferon production IEA
 biological_processGO:0032688 negative regulation of interferon-beta production IEA
 biological_processGO:0035050 embryonic heart tube development IEA
 biological_processGO:0036342 post-anal tail morphogenesis IEA
 biological_processGO:0042073 intraciliary transport IBA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0050687 negative regulation of defense response to virus IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0070507 regulation of microtubule cytoskeleton organization IEA
 biological_processGO:1901621 negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme IEA
 cellular_componentGO:0030992 intraciliary transport particle B IEA
 cellular_componentGO:0035869 ciliary transition zone IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 cellular_componentGO:0097542 ciliary tip IEA
 cellular_componentGO:0097546 ciliary base IEA
 molecular_functionGO:0008017 microtubule binding IEA


Pathways (from Reactome)
Pathway description
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr