ENSGALG00000004249


Gallus gallus

Features
Gene ID: ENSGALG00000004249
  
Biological name :GRHL3
  
Synonyms : grainyhead like transcription factor 3 / GRHL3
  
Possible biological names infered from orthology : Grainyhead-like / Q5FWH3 / Q8TE85
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 5719948
Gene end: 5741312
  
Corresponding Affymetrix probe sets: GgaAffx.2627.1.S1_at (Chicken Array)   GgaAffx.2627.2.S1_at (Chicken Array)   GgaAffx.2627.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052000
Ensembl peptide - ENSGALP00000006748
NCBI entrez gene - 419695     See in Manteia.
RefSeq - XM_417842
RefSeq - XM_004947906
RefSeq - XM_004947907
RefSeq - XM_004947904
RefSeq - XM_004947905
swissprot - F1NZ42
swissprot - A0A1D5PGS7
Ensembl - ENSGALG00000004249
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 grhl3ENSDARG00000078552Danio rerio
 GRHL3ENSG00000158055Homo sapiens
 Grhl3ENSMUSG00000037188Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GRHL1 / grainyhead like transcription factor 1 / Q921D9* / Q9NZI5* / Grainyhead-like *ENSGALG0000003849546
GRHL2 / grainyhead like transcription factor 2 / Q6ISB3* / Q8K5C0* / Grainyhead-like *ENSGALG0000003768745
TFCP2L1 / transcription factor CP2 like 1 / Q3UNW5* / Q9NZI6* / Transcription factor CP2-like protein 1 *ENSGALG0000001163518
UBP1 / upstream binding protein 1 / Q811S7* / Q9NZI7*ENSGALG0000003563017


Protein motifs (from Interpro)
Interpro ID Name
 IPR007604  CP2 transcription factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001736 establishment of planar polarity IEA
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0007398 ectoderm development IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0008544 epidermis development IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0032956 regulation of actin cytoskeleton organization IEA
 biological_processGO:0042060 wound healing IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0061029 eyelid development in camera-type eye IEA
 biological_processGO:0061436 establishment of skin barrier IEA
 biological_processGO:0090103 cochlea morphogenesis IEA
 biological_processGO:0090179 planar cell polarity pathway involved in neural tube closure IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0031490 chromatin DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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