ENSGALG00000035630


Gallus gallus

Features
Gene ID: ENSGALG00000035630
  
Biological name :UBP1
  
Synonyms : UBP1 / upstream binding protein 1
  
Possible biological names infered from orthology : Q811S7 / Q9NZI7
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 44786583
Gene end: 44814622
  
Corresponding Affymetrix probe sets: Gga.5436.1.S1_at (Chicken Array)   GgaAffx.7602.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056998
NCBI entrez gene - 428458     See in Manteia.
RefSeq - XM_003640723
RefSeq - XM_426018
RefSeq - XM_004939488
RefSeq - XM_015281719
swissprot - A0A1D5PVM3
Ensembl - ENSGALG00000035630
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubp1ENSDARG00000018000Danio rerio
 UBP1ENSG00000153560Homo sapiens
 Ubp1ENSMUSG00000009741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TFCP2L1 / transcription factor CP2 like 1 / Q3UNW5* / Q9NZI6* / Transcription factor CP2-like protein 1 *ENSGALG0000001163559
GRHL1 / grainyhead like transcription factor 1 / Q921D9* / Q9NZI5* / Grainyhead-like *ENSGALG0000003849522
GRHL2 / grainyhead like transcription factor 2 / Q6ISB3* / Q8K5C0* / Grainyhead-like *ENSGALG0000003768722
GRHL3 / grainyhead like transcription factor 3 / Q5FWH3* / Q8TE85* / Grainyhead-like *ENSGALG0000000424920


Protein motifs (from Interpro)
Interpro ID Name
 IPR007604  CP2 transcription factor
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr