ENSG00000153560


Homo sapiens

Features
Gene ID: ENSG00000153560
  
Biological name :UBP1
  
Synonyms : Q9NZI7 / UBP1 / upstream binding protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p22.3
Gene start: 33388336
Gene end: 33441371
  
Corresponding Affymetrix probe sets: 218082_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000283629
Ensembl peptide - ENSP00000401614
Ensembl peptide - ENSP00000395558
Ensembl peptide - ENSP00000393842
Ensembl peptide - ENSP00000283628
NCBI entrez gene - 7342     See in Manteia.
OMIM - 609784
RefSeq - NM_014517
RefSeq - NM_001128160
RefSeq - NM_001128161
RefSeq Peptide - NP_001121632
RefSeq Peptide - NP_001121633
RefSeq Peptide - NP_055332
swissprot - Q9NZI7
swissprot - A0A024R2L0
swissprot - A0A024R2J0
swissprot - F8WEP8
swissprot - C9JWL3
Ensembl - ENSG00000153560
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubp1ENSDARG00000018000Danio rerio
 UBP1ENSGALG00000035630Gallus gallus
 Ubp1ENSMUSG00000009741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TFCP2 / Q12800 / transcription factor CP2ENSG0000013545768
Q9NZI6 / TFCP2L1 / transcription factor CP2 like 1ENSG0000011511259
GRHL2 / Q6ISB3 / grainyhead like transcription factor 2ENSG0000008330722
GRHL1 / Q9NZI5 / grainyhead like transcription factor 1ENSG0000013431722
GRHL3 / Q8TE85 / grainyhead like transcription factor 3ENSG0000015805520


Protein motifs (from Interpro)
Interpro ID Name
 IPR007604  CP2 transcription factor
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0019079 viral genome replication TAS
 biological_processGO:0045892 negative regulation of transcription, DNA-templated TAS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0003714 transcription corepressor activity TAS
 molecular_functionGO:0043565 sequence-specific DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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