ENSG00000115112


Homo sapiens

Features
Gene ID: ENSG00000115112
  
Biological name :TFCP2L1
  
Synonyms : Q9NZI6 / TFCP2L1 / transcription factor CP2 like 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q14.2
Gene start: 121216587
Gene end: 121285207
  
Corresponding Affymetrix probe sets: 219735_s_at (Human Genome U133 Plus 2.0 Array)   227642_at (Human Genome U133 Plus 2.0 Array)   229341_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000263707
NCBI entrez gene - 29842     See in Manteia.
OMIM - 609785
RefSeq - XM_017003903
RefSeq - NM_014553
RefSeq - XM_017003902
RefSeq Peptide - NP_055368
swissprot - Q9NZI6
Ensembl - ENSG00000115112
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfcp2l1ENSDARG00000029497Danio rerio
 TFCP2L1ENSGALG00000011635Gallus gallus
 Q3UNW5ENSMUSG00000026380Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TFCP2 / Q12800 / transcription factor CP2ENSG0000013545773
UBP1 / Q9NZI7 / upstream binding protein 1ENSG0000015356066
GRHL2 / Q6ISB3 / grainyhead like transcription factor 2ENSG0000008330725
GRHL1 / Q9NZI5 / grainyhead like transcription factor 1ENSG0000013431724
GRHL3 / Q8TE85 / grainyhead like transcription factor 3ENSG0000015805523


Protein motifs (from Interpro)
Interpro ID Name
 IPR007604  CP2 transcription factor
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0000902 cell morphogenesis IEA
 biological_processGO:0002070 epithelial cell maturation IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006694 steroid biosynthetic process TAS
 biological_processGO:0007028 cytoplasm organization IEA
 biological_processGO:0007431 salivary gland development IEA
 biological_processGO:0007565 female pregnancy TAS
 biological_processGO:0008340 determination of adult lifespan IEA
 biological_processGO:0045927 positive regulation of growth IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0003714 transcription corepressor activity TAS
 molecular_functionGO:0043565 sequence-specific DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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