ENSG00000083307


Homo sapiens

Features
Gene ID: ENSG00000083307
  
Biological name :GRHL2
  
Synonyms : grainyhead like transcription factor 2 / GRHL2 / Q6ISB3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q22.3
Gene start: 101492432
Gene end: 101669726
  
Corresponding Affymetrix probe sets: 219388_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000251808
Ensembl peptide - ENSP00000379260
Ensembl peptide - ENSP00000430473
Ensembl peptide - ENSP00000495564
NCBI entrez gene - 79977     See in Manteia.
OMIM - 608576
RefSeq - XM_011517307
RefSeq - NM_001330593
RefSeq - NM_024915
RefSeq - XM_011517305
RefSeq - XM_011517306
RefSeq Peptide - NP_001317522
RefSeq Peptide - NP_079191
swissprot - Q6ISB3
Ensembl - ENSG00000083307
  
Related genetic diseases (OMIM): 608641 - Deafness, autosomal dominant 28, 608641
  616029 - Ectodermal dysplasia/short stature syndrome, 616029

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 grhl2aENSDARG00000058342Danio rerio
 grhl2bENSDARG00000061974Danio rerio
 GRHL2ENSGALG00000037687Gallus gallus
 Grhl2ENSMUSG00000022286Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GRHL1 / Q9NZI5 / grainyhead like transcription factor 1ENSG0000013431758
GRHL3 / Q8TE85 / grainyhead like transcription factor 3ENSG0000015805544
TFCP2 / Q12800 / transcription factor CP2ENSG0000013545720
Q9NZI6 / TFCP2L1 / transcription factor CP2 like 1ENSG0000011511219
UBP1 / Q9NZI7 / upstream binding protein 1ENSG0000015356019


Protein motifs (from Interpro)
Interpro ID Name
 IPR007604  CP2 transcription factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001843 neural tube closure ISS
 biological_processGO:0003208 cardiac ventricle morphogenesis IEA
 biological_processGO:0003382 epithelial cell morphogenesis ISS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007155 cell adhesion IMP
 biological_processGO:0007420 brain development IBA
 biological_processGO:0008283 cell proliferation IMP
 biological_processGO:0008544 epidermis development IDA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0021915 neural tube development IBA
 biological_processGO:0030323 respiratory tube development IEA
 biological_processGO:0034329 cell junction assembly IMP
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0044030 regulation of DNA methylation IMP
 biological_processGO:0045617 negative regulation of keratinocyte differentiation IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0048568 embryonic organ development IEA
 biological_processGO:0048701 embryonic cranial skeleton morphogenesis IEA
 biological_processGO:0051973 positive regulation of telomerase activity IMP
 biological_processGO:0060324 face development IEA
 biological_processGO:0060463 lung lobe morphogenesis IEA
 biological_processGO:0060487 lung epithelial cell differentiation ISS
 biological_processGO:0060672 epithelial cell morphogenesis involved in placental branching IEA
 biological_processGO:0070830 bicellular tight junction assembly IMP
 biological_processGO:0090132 epithelium migration ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005911 cell-cell junction IDA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001161 intronic transcription regulatory region sequence-specific DNA binding ISS
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031490 chromatin DNA binding IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
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 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
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 HP:0001798 Anonychia "Total absence of nails." [HPO:curators]
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002099 Asthma "Asthma is characterized by increased responsiveness of the tracheobronchial tree to multiple stimuli, leading to narrowing of the air passages with resultant dyspnea, cough, and wheezing." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0006297 Hypoplastic dental enamel 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0025092 Epidermal acanthosis "Diffuse hypertrophy or thickening of the stratum spinosum of the epidermis (prickle cell layer of the skin)." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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