ENSGALG00000004555


Gallus gallus

Features
Gene ID: ENSGALG00000004555
  
Biological name :RBM22
  
Synonyms : pre-mRNA-splicing factor RBM22 / RBM22
  
Possible biological names infered from orthology : Q8BHS3 / Q9NW64 / RNA binding motif protein 22
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 13077785
Gene end: 13084895
  
Corresponding Affymetrix probe sets: Gga.10200.1.S1_at (Chicken Array)   Gga.4751.1.S1_at (Chicken Array)   GgaAffx.11671.1.S1_s_at (Chicken Array)   GgaAffx.2815.1.S1_at (Chicken Array)   GgaAffx.2815.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058710
Ensembl peptide - ENSGALP00000007237
NCBI entrez gene - 416270     See in Manteia.
RefSeq - NM_001006151
RefSeq Peptide - NP_001006151
swissprot - F1NMD7
swissprot - A0A1L1RIY7
Ensembl - ENSGALG00000004555
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm22ENSDARG00000010238Danio rerio
 RBM22ENSG00000086589Homo sapiens
 Rbm22ENSMUSG00000024604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR000571  Zinc finger, CCCH-type
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000060 protein import into nucleus, translocation IEA
 biological_processGO:0033120 positive regulation of RNA splicing IEA
 biological_processGO:0035690 cellular response to drug IEA
 biological_processGO:0042307 positive regulation of protein import into nucleus IEA
 biological_processGO:0045292 mRNA cis splicing, via spliceosome IEA
 biological_processGO:0046827 positive regulation of protein export from nucleus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0017070 U6 snRNA binding IEA
 molecular_functionGO:0036002 pre-mRNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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