ENSGALG00000004578


Gallus gallus

Features
Gene ID: ENSGALG00000004578
  
Biological name :RABGAP1L
  
Synonyms : RABGAP1L / rab GTPase-activating protein 1-like
  
Possible biological names infered from orthology : A6H6A9 / B7ZAP0 / Q5R372
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 7136271
Gene end: 7334536
  
Corresponding Affymetrix probe sets: Gga.5726.1.S1_at (Chicken Array)   GgaAffx.12720.1.S1_at (Chicken Array)   GgaAffx.26251.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007275
Ensembl peptide - ENSGALP00000057403
Ensembl peptide - ENSGALP00000056612
Ensembl peptide - ENSGALP00000049915
Ensembl peptide - ENSGALP00000032966
NCBI entrez gene - 424438     See in Manteia.
RefSeq - XM_004943266
RefSeq - XM_015290305
RefSeq - XM_015290302
RefSeq - XM_015290301
RefSeq - XM_015290300
RefSeq - NM_001012923
RefSeq Peptide - NP_001012941
swissprot - E1BQJ0
swissprot - F1P1H7
swissprot - A0A1D5PAZ8
swissprot - A0A1D5PUK8
swissprot - A0A1D5PWR6
Ensembl - ENSGALG00000004578
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rabgap1l2ENSDARG00000060315Danio rerio
 B7ZAP0ENSG00000152061Homo sapiens
 A6H6A9ENSMUSG00000026721Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RABGAP1 / RAB GTPase activating protein 1 / A2AWA9* / Q9Y3P9*ENSGALG0000000122563
TBC1D1 / TBC1 domain family member 1 / Q60949* / Q86TI0*ENSGALG0000003938021
TBC1D4 / TBC1 domain family member 4 / O60343*ENSGALG0000001692519
TBC1D14 / TBC1 domain family member 14 / Q9P2M4*ENSGALG0000001554612
TBC1D12 / TBC1 domain family member 12 / O60347*ENSGALG0000003404410


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily
 IPR022164  Kinesin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0032880 regulation of protein localization IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005929 cilium IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr