ENSDARG00000060315


Danio rerio

Features
Gene ID: ENSDARG00000060315
  
Biological name :rabgap1l2
  
Synonyms : rabgap1l2 / RAB GTPase activating protein 1-like 2
  
Possible biological names infered from orthology : A6H6A9 / B7ZAP0 / Q5R372 / RABGAP1L / RAB GTPase activating protein 1 like
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 36898982
Gene end: 36905195
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000079294
NCBI entrez gene - 565728     See in Manteia.
swissprot - B0S6B7
ZFIN ID - ZDB-GENE-070912-414
Ensembl - ENSDARG00000060315
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RABGAP1LENSGALG00000004578Gallus gallus
 B7ZAP0ENSG00000152061Homo sapiens
 A6H6A9ENSMUSG00000026721Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rabgap1l / RAB GTPase activating protein 1-likeENSDARG0000006175751
rabgap1 / RAB GTPase activating protein 1 / Q9Y3P9*ENSDARG0000009896743
evi5b / ecotropic viral integration site 5b / EVI5* / O60447* / ecotropic viral integration site 5*ENSDARG0000007083921
EVI5L / si:ch211-239f4.1 / Q96CN4* / ecotropic viral integration site 5 like* / Mus musculus ecotropic viral integration site 5 like (Evi5l), transcript variant 2, mRNA.*ENSDARG0000005276621
evi5a / ecotropic viral integration site 5aENSDARG0000007766614
tbc1d4 / TBC1 domain family, member 4 / O60343*ENSDARG0000007515610
tbc1d1 / TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 / Q60949* / Q86TI0* / TBC1 domain family member 1*ENSDARG000000620818
tbc1d12b / TBC1 domain family, member 12b / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG000000737714
tbc1d14 / TBC1 domain family, member 14 / Q9P2M4*ENSDARG000000035203
AL935174.4 / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG000001120883


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr