ENSDARG00000061757


Danio rerio

Features
Gene ID: ENSDARG00000061757
  
Biological name :rabgap1l
  
Synonyms : rabgap1l / RAB GTPase activating protein 1-like
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 17312111
Gene end: 17454457
  
Corresponding Affymetrix probe sets: Dr.16426.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122088
Ensembl peptide - ENSDARP00000082893
Ensembl peptide - ENSDARP00000116752
swissprot - E9QDE9
swissprot - Q1LVY2
swissprot - Q1LVY3
ZFIN ID - ZDB-GENE-050208-389
Ensembl - ENSDARG00000061757
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rabgap1 / RAB GTPase activating protein 1 / Q9Y3P9*ENSDARG0000009896758
rabgap1l2 / RAB GTPase activating protein 1-like 2 / A6H6A9* / B7ZAP0* / Q5R372* / RABGAP1L* / RAB GTPase activating protein 1 like*ENSDARG0000006031554
EVI5L / si:ch211-239f4.1 / Q96CN4* / ecotropic viral integration site 5 like* / Mus musculus ecotropic viral integration site 5 like (Evi5l), transcript variant 2, mRNA.*ENSDARG0000005276622
evi5b / ecotropic viral integration site 5b / EVI5* / O60447* / ecotropic viral integration site 5*ENSDARG0000007083921
evi5a / ecotropic viral integration site 5aENSDARG0000007766612
tbc1d4 / TBC1 domain family, member 4 / O60343*ENSDARG000000751569
tbc1d1 / TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 / Q60949* / Q86TI0* / TBC1 domain family member 1*ENSDARG000000620819
AL935174.4 / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG000001120883
tbc1d12b / TBC1 domain family, member 12b / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG000000737712
tbc1d14 / TBC1 domain family, member 14 / Q9P2M4*ENSDARG000000035202


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily
 IPR022164  Kinesin-like
 IPR033185  Rab GTPase-activating protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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