ENSDARG00000003520


Danio rerio

Features
Gene ID: ENSDARG00000003520
  
Biological name :tbc1d14
  
Synonyms : tbc1d14 / TBC1 domain family, member 14
  
Possible biological names infered from orthology : Q9P2M4
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 39679944
Gene end: 39705763
  
Corresponding Affymetrix probe sets: Dr.22416.1.A1_at (Zebrafish Array)   Dr.7333.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121985
Ensembl peptide - ENSDARP00000040945
Ensembl peptide - ENSDARP00000153719
Ensembl peptide - ENSDARP00000154633
NCBI entrez gene - 557744     See in Manteia.
swissprot - E7F9B3
ZFIN ID - ZDB-GENE-030131-6136
Ensembl - ENSDARG00000003520
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D14ENSGALG00000015546Gallus gallus
 Q9P2M4ENSG00000132405Homo sapiens
 Tbc1d14ENSMUSG00000029192Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d12b / TBC1 domain family, member 12b / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG0000007377146
tbc1d1 / TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 / Q60949* / Q86TI0* / TBC1 domain family member 1*ENSDARG0000006208116
rabgap1 / RAB GTPase activating protein 1 / Q9Y3P9*ENSDARG0000009896715
tbc1d4 / TBC1 domain family, member 4 / O60343*ENSDARG0000007515615
AL935174.4 / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG0000011208814
EVI5L / si:ch211-239f4.1 / Q96CN4* / ecotropic viral integration site 5 like* / Mus musculus ecotropic viral integration site 5 like (Evi5l), transcript variant 2, mRNA.*ENSDARG0000005276612
evi5b / ecotropic viral integration site 5b / EVI5* / O60447* / ecotropic viral integration site 5*ENSDARG0000007083911
evi5a / ecotropic viral integration site 5aENSDARG0000007766611
rabgap1l2 / RAB GTPase activating protein 1-like 2 / A6H6A9* / B7ZAP0* / Q5R372* / RABGAP1L* / RAB GTPase activating protein 1 like*ENSDARG000000603151
rabgap1l / RAB GTPase activating protein 1-likeENSDARG000000617571


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 biological_processGO:2000785 regulation of autophagosome assembly IBA
 cellular_componentGO:0005776 autophagosome IBA
 cellular_componentGO:0055037 recycling endosome IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000074481 ulk1b / unc-51 like autophagy activating kinase 1 / ULK1* / O75385* / unc-51 like kinase 1*  / reaction / complex
 ENSDARG00000041878 rab11ba / RAB11B, member RAS oncogene family, a / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*  / reaction / complex
 ENSDARG00000090086 rab11bb / RAB11B, member RAS oncogene family, b / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*  / reaction / complex






 

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