ENSDARG00000073771


Danio rerio

Features
Gene ID: ENSDARG00000073771
  
Biological name :tbc1d12b
  
Synonyms : tbc1d12b / TBC1 domain family, member 12b
  
Possible biological names infered from orthology : O60347 / TBC1D12 / TBC1 domain family member 12
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 5424108
Gene end: 5455936
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101937
Ensembl peptide - ENSDARP00000155017
NCBI entrez gene - 100332088     See in Manteia.
swissprot - E7FDW4
ZFIN ID - ZDB-GENE-121214-108
Ensembl - ENSDARG00000073771
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D12ENSGALG00000034044Gallus gallus
 O60347ENSG00000108239Homo sapiens
 Tbc1d12ENSMUSG00000048720Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d14 / TBC1 domain family, member 14 / Q9P2M4*ENSDARG0000000352042
tbc1d4 / TBC1 domain family, member 4 / O60343*ENSDARG0000007515615
tbc1d1 / TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 / Q60949* / Q86TI0* / TBC1 domain family member 1*ENSDARG0000006208115
AL935174.4 / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG0000011208815
rabgap1 / RAB GTPase activating protein 1 / Q9Y3P9*ENSDARG0000009896713
evi5b / ecotropic viral integration site 5b / EVI5* / O60447* / ecotropic viral integration site 5*ENSDARG0000007083912
EVI5L / si:ch211-239f4.1 / Q96CN4* / ecotropic viral integration site 5 like* / Mus musculus ecotropic viral integration site 5 like (Evi5l), transcript variant 2, mRNA.*ENSDARG0000005276612
evi5a / ecotropic viral integration site 5aENSDARG0000007766611
rabgap1l2 / RAB GTPase activating protein 1-like 2 / A6H6A9* / B7ZAP0* / Q5R372* / RABGAP1L* / RAB GTPase activating protein 1 like*ENSDARG000000603152
rabgap1l / RAB GTPase activating protein 1-likeENSDARG000000617571


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 biological_processGO:2000785 regulation of autophagosome assembly IBA
 cellular_componentGO:0005776 autophagosome IBA
 cellular_componentGO:0055037 recycling endosome IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr