ENSG00000108239


Homo sapiens

Features
Gene ID: ENSG00000108239
  
Biological name :TBC1D12
  
Synonyms : O60347 / TBC1D12 / TBC1 domain family member 12
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q23.33
Gene start: 94402504
Gene end: 94535930
  
Corresponding Affymetrix probe sets: 1557609_s_at (Human Genome U133 Plus 2.0 Array)   221858_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000225235
NCBI entrez gene - 23232     See in Manteia.
RefSeq - XM_017015999
RefSeq - NM_015188
RefSeq - XM_017015996
RefSeq - XM_017015998
RefSeq - XM_006717732
RefSeq - XM_006717733
RefSeq - XM_011539558
RefSeq Peptide - NP_056003
swissprot - O60347
Ensembl - ENSG00000108239
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AL935174.4ENSDARG00000112088Danio rerio
 tbc1d12bENSDARG00000073771Danio rerio
 TBC1D12ENSGALG00000034044Gallus gallus
 Tbc1d12ENSMUSG00000048720Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9P2M4 / TBC1D14 / TBC1 domain family member 14ENSG0000013240547
Q86TI0 / TBC1D1 / TBC1 domain family member 1ENSG0000006588216
O60343 / TBC1D4 / TBC1 domain family member 4ENSG0000013611116
B7ZAP0 / Q5R372 / RABGAP1L / RAB GTPase activating protein 1 likeENSG0000015206114
Q9Y3P9 / RABGAP1 / RAB GTPase activating protein 1ENSG0000001145414
EVI5 / O60447 / ecotropic viral integration site 5ENSG0000006720812
EVI5L / Q96CN4 / ecotropic viral integration site 5 likeENSG0000014245912


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR035969  Rab-GTPase-TBC domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 biological_processGO:2000785 regulation of autophagosome assembly IBA
 cellular_componentGO:0005776 autophagosome IBA
 cellular_componentGO:0055037 recycling endosome IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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