ENSDARG00000075156


Danio rerio

Features
Gene ID: ENSDARG00000075156
  
Biological name :tbc1d4
  
Synonyms : tbc1d4 / TBC1 domain family, member 4
  
Possible biological names infered from orthology : O60343
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 30585552
Gene end: 30639362
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000151394
Ensembl peptide - ENSDARP00000156949
Ensembl peptide - ENSDARP00000114090
Ensembl peptide - ENSDARP00000114595
Ensembl peptide - ENSDARP00000132470
swissprot - A0A0R4ICD0
swissprot - E9QC96
swissprot - F1QE75
ZFIN ID - ZDB-GENE-030131-9881
Ensembl - ENSDARG00000075156
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D4ENSGALG00000016925Gallus gallus
 O60343ENSG00000136111Homo sapiens
 Tbc1d4ENSMUSG00000033083Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d1 / TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 / Q60949* / Q86TI0* / TBC1 domain family member 1*ENSDARG0000006208142
rabgap1 / RAB GTPase activating protein 1 / Q9Y3P9*ENSDARG0000009896715
evi5b / ecotropic viral integration site 5b / EVI5* / O60447* / ecotropic viral integration site 5*ENSDARG0000007083910
EVI5L / si:ch211-239f4.1 / Q96CN4* / ecotropic viral integration site 5 like* / Mus musculus ecotropic viral integration site 5 like (Evi5l), transcript variant 2, mRNA.*ENSDARG0000005276610
tbc1d12b / TBC1 domain family, member 12b / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG0000007377110
tbc1d14 / TBC1 domain family, member 14 / Q9P2M4*ENSDARG000000035209
evi5a / ecotropic viral integration site 5aENSDARG000000776668
rabgap1l2 / RAB GTPase activating protein 1-like 2 / A6H6A9* / B7ZAP0* / Q5R372* / RABGAP1L* / RAB GTPase activating protein 1 like*ENSDARG000000603153
rabgap1l / RAB GTPase activating protein 1-likeENSDARG000000617572
AL935174.4 / O60347* / TBC1D12* / TBC1 domain family member 12*ENSDARG000001120882


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily
 IPR021785  Domain of unknown function DUF3350
 IPR033564  TBC1 domain family member 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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