ENSGALG00000016925


Gallus gallus

Features
Gene ID: ENSGALG00000016925
  
Biological name :TBC1D4
  
Synonyms : TBC1D4 / TBC1 domain family member 4
  
Possible biological names infered from orthology : O60343
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 155120417
Gene end: 155197498
  
Corresponding Affymetrix probe sets: Gga.16127.1.S1_at (Chicken Array)   GgaAffx.10842.2.S1_s_at (Chicken Array)   GgaAffx.10842.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027310
Ensembl peptide - ENSGALP00000052288
Ensembl peptide - ENSGALP00000052129
Ensembl peptide - ENSGALP00000044585
NCBI entrez gene - 428062     See in Manteia.
RefSeq - XM_015277031
RefSeq - XM_015277035
RefSeq - XM_015277042
swissprot - E1BXY1
swissprot - A0A1D5NW49
swissprot - A0A1D5PHK8
swissprot - A0A1D5PH52
Ensembl - ENSGALG00000016925
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbc1d4ENSDARG00000075156Danio rerio
 O60343ENSG00000136111Homo sapiens
 Tbc1d4ENSMUSG00000033083Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D1 / TBC1 domain family member 1 / Q60949* / Q86TI0*ENSGALG0000003938049
RABGAP1 / RAB GTPase activating protein 1 / A2AWA9* / Q9Y3P9*ENSGALG0000000122518
RABGAP1L / rab GTPase-activating protein 1-like / A6H6A9* / B7ZAP0* / Q5R372*ENSGALG0000000457817
TBC1D14 / TBC1 domain family member 14 / Q9P2M4*ENSGALG0000001554611
TBC1D12 / TBC1 domain family member 12 / O60347*ENSGALG0000003404410


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily
 IPR021785  Domain of unknown function DUF3350
 IPR033564  TBC1 domain family member 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0032869 cellular response to insulin stimulus IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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