ENSGALG00000004920


Gallus gallus

Features
Gene ID: ENSGALG00000004920
  
Biological name :TRUB2
  
Synonyms : TRUB2 / TruB pseudouridine synthase family member 2
  
Possible biological names infered from orthology : O95900 / Q91WG3 / TruB pseudouridine (psi) synthase family member 2
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 5524870
Gene end: 5528174
  
Corresponding Affymetrix probe sets: Gga.9990.1.S1_at (Chicken Array)   GgaAffx.21446.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007858
NCBI entrez gene - 417218     See in Manteia.
RefSeq - XM_015279564
swissprot - F1NEP1
Ensembl - ENSGALG00000004920
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trub2ENSDARG00000028379Danio rerio
 TRUB2ENSG00000167112Homo sapiens
 Trub2ENSMUSG00000039826Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRUB1 / TruB pseudouridine synthase family member 1 / Q8C0D0* / Q8WWH5* / Probable tRNA pseudouridine synthase 1 *ENSGALG0000000909122


Protein motifs (from Interpro)
Interpro ID Name
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0009451 RNA modification IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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