ENSG00000167112


Homo sapiens

Features
Gene ID: ENSG00000167112
  
Biological name :TRUB2
  
Synonyms : O95900 / TRUB2 / TruB pseudouridine synthase family member 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q34.11
Gene start: 128305161
Gene end: 128322742
  
Corresponding Affymetrix probe sets: 223109_at (Human Genome U133 Plus 2.0 Array)   232218_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000361982
NCBI entrez gene - 26995     See in Manteia.
OMIM - 610727
RefSeq - NM_015679
RefSeq Peptide - NP_056494
swissprot - A0A024R886
swissprot - O95900
Ensembl - ENSG00000167112
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trub2ENSDARG00000028379Danio rerio
 TRUB2ENSGALG00000004920Gallus gallus
 Trub2ENSMUSG00000039826Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRUB1 / Q8WWH5 / TruB pseudouridine synthase family member 1ENSG0000016583227


Protein motifs (from Interpro)
Interpro ID Name
 IPR002501  Pseudouridine synthase II, N-terminal
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr