ENSGALG00000005012


Gallus gallus

Features
Gene ID: ENSGALG00000005012
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : ISY1 / ISY1-RAB43 / ISY1-RAB43 readthrough / ISY1 splicing factor homolog / Pre-mRNA-splicing factor ISY1 homolog / Q69ZQ2 / Q9ULR0
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 5054111
Gene end: 5063325
  
Corresponding Affymetrix probe sets: Gga.5565.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008013
Ensembl peptide - ENSGALP00000046389
NCBI entrez gene - 415968     See in Manteia.
RefSeq - XM_414311
swissprot - A0A1D5P157
swissprot - F1P220
Ensembl - ENSGALG00000005012
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 isy1ENSDARG00000063466Danio rerio
 ISY1ENSG00000240682Homo sapiens
 ISY1-RAB43ENSG00000261796Homo sapiens
 Isy1ENSMUSG00000030056Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009360  Pre-mRNA-splicing factor Isy1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000350 generation of catalytic spliceosome for second transesterification step IEA
 biological_processGO:0000389 mRNA 3"-splice site recognition IBA
 cellular_componentGO:0000974 Prp19 complex IBA
 cellular_componentGO:0071012 catalytic step 1 spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 cellular_componentGO:0071014 post-mRNA release spliceosomal complex IBA
 cellular_componentGO:0071020 post-spliceosomal complex IBA
 molecular_functionGO:0000384 first spliceosomal transesterification activity IBA


Pathways (from Reactome)
Pathway description
Formation of TC-NER Pre-Incision Complex
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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