ENSGALG00000005207


Gallus gallus

Features
Gene ID: ENSGALG00000005207
  
Biological name :SYNPO2L
  
Synonyms : synaptopodin 2 like / SYNPO2L
  
Possible biological names infered from orthology : Q8BWB1 / Q9H987
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 15971180
Gene end: 16002247
  
Corresponding Affymetrix probe sets: GgaAffx.3250.1.S1_at (Chicken Array)   GgaAffx.3254.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055611
NCBI entrez gene - 423743     See in Manteia.
RefSeq - XM_421618
swissprot - A0A1D5PRT3
Ensembl - ENSGALG00000005207
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 synpo2laENSDARG00000077293Danio rerio
 synpo2lbENSDARG00000078696Danio rerio
 Q9H987ENSG00000166317Homo sapiens
 Q8BWB1ENSMUSG00000039376Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYNPO2 / synaptopodin 2 / Q91YE8* / Q9UMS6*ENSGALG0000001199435
SYNPO / synaptopodin / Q8CC35* / Q8N3V7*ENSGALG0000002733013


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0030054 cell junction IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr