ENSGALG00000011994


Gallus gallus

Features
Gene ID: ENSGALG00000011994
  
Biological name :SYNPO2
  
Synonyms : synaptopodin 2 / SYNPO2
  
Possible biological names infered from orthology : Q91YE8 / Q9UMS6
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 55168618
Gene end: 55260528
  
Corresponding Affymetrix probe sets: GgaAffx.7609.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019540
NCBI entrez gene - 428768     See in Manteia.
RefSeq - XM_004941230
swissprot - F1NH40
Ensembl - ENSGALG00000011994
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 synpo2bENSDARG00000077157Danio rerio
 Q9UMS6ENSG00000172403Homo sapiens
 Q91YE8ENSMUSG00000050315Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYNPO2L / synaptopodin 2 like / Q8BWB1* / Q9H987*ENSGALG0000000520725
SYNPO / synaptopodin / Q8CC35* / Q8N3V7*ENSGALG0000002733013


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032233 positive regulation of actin filament bundle assembly IBA
 cellular_componentGO:0001725 stress fiber IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003779 actin binding IBA
 molecular_functionGO:0031005 filamin binding IEA
 molecular_functionGO:0051393 alpha-actinin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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