ENSDARG00000077157


Danio rerio

Features
Gene ID: ENSDARG00000077157
  
Biological name :synpo2b
  
Synonyms : synaptopodin 2b / synpo2b
  
Possible biological names infered from orthology : Q91YE8 / Q9UMS6 / synaptopodin 2 / SYNPO2
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 25959084
Gene end: 25966411
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113396
Ensembl peptide - ENSDARP00000152411
Ensembl peptide - ENSDARP00000117241
NCBI entrez gene - 100006620     See in Manteia.
RefSeq - XM_017356099
swissprot - E9QFY4
swissprot - E9QCI3
ZFIN ID - ZDB-GENE-101230-1
Ensembl - ENSDARG00000077157
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYNPO2ENSGALG00000011994Gallus gallus
 Q9UMS6ENSG00000172403Homo sapiens
 Q91YE8ENSMUSG00000050315Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
synpo2lb / synaptopodin 2-like b / Q8BWB1* / Q9H987* / SYNPO2L* / synaptopodin 2 like*ENSDARG0000007869620
LO018188.1 / SYNPO* / Q8N3V7* / synaptopodin*ENSDARG0000010687317
synpo2la / synaptopodin 2-like a / Q8BWB1* / Q9H987* / SYNPO2L* / synaptopodin 2 like*ENSDARG0000007729315


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032233 positive regulation of actin filament bundle assembly IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0015629 actin cytoskeleton IBA
 cellular_componentGO:0030018 Z disc IBA
 molecular_functionGO:0003779 actin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr