ENSGALG00000005268


Gallus gallus

Features
Gene ID: ENSGALG00000005268
  
Biological name :SEC22C
  
Synonyms : SEC22C / SEC22 homolog C, vesicle trafficking protein
  
Possible biological names infered from orthology : Q8BXT9 / Q9BRL7 / Vesicle-trafficking protein SEC22c
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 1911806
Gene end: 1920512
  
Corresponding Affymetrix probe sets: Gga.10119.1.S1_at (Chicken Array)   Gga.13715.1.A1_at (Chicken Array)   Gga.13715.1.S1_at (Chicken Array)   Gga.15204.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053998
NCBI entrez gene - 420387     See in Manteia.
RefSeq - XM_004939071
RefSeq - XM_015281147
RefSeq - XM_015281148
RefSeq - XM_015281149
RefSeq - XM_418493
RefSeq - XM_004939070
swissprot - A0A1D5PMC2
Ensembl - ENSGALG00000005268
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec22cENSDARG00000063387Danio rerio
 Q9BRL7ENSG00000093183Homo sapiens
 Q8BXT9ENSMUSG00000061536Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SEC22A / SEC22 homolog A, vesicle trafficking protein / Q8BH47* / Q96IW7*ENSGALG0000001169744
Q5ZJW4 / SEC22B / Vesicle-trafficking protein SEC22b / O08547* / O75396* / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)*ENSGALG0000003970420


Protein motifs (from Interpro)
Interpro ID Name
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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