ENSG00000093183


Homo sapiens

Features
Gene ID: ENSG00000093183
  
Biological name :SEC22C
  
Synonyms : Q9BRL7 / SEC22C / SEC22 homolog C, vesicle trafficking protein
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p22.1
Gene start: 42547969
Gene end: 42601080
  
Corresponding Affymetrix probe sets: 224470_at (Human Genome U133 Plus 2.0 Array)   225460_at (Human Genome U133 Plus 2.0 Array)   235120_at (Human Genome U133 Plus 2.0 Array)   236268_at (Human Genome U133 Plus 2.0 Array)   239013_at (Human Genome U133 Plus 2.0 Array)   239056_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000391957
Ensembl peptide - ENSP00000397170
Ensembl peptide - ENSP00000415969
Ensembl peptide - ENSP00000414576
Ensembl peptide - ENSP00000411725
Ensembl peptide - ENSP00000408242
Ensembl peptide - ENSP00000407564
Ensembl peptide - ENSP00000404987
Ensembl peptide - ENSP00000264454
Ensembl peptide - ENSP00000273156
Ensembl peptide - ENSP00000373256
Ensembl peptide - ENSP00000389589
Ensembl peptide - ENSP00000391170
NCBI entrez gene - 9117     See in Manteia.
OMIM - 604028
RefSeq - XM_017007439
RefSeq - NM_001201572
RefSeq - NM_001201584
RefSeq - NM_004206
RefSeq - NM_032970
RefSeq - XM_005265533
RefSeq - XM_005265534
RefSeq - XM_005265535
RefSeq - XM_011534212
RefSeq - XM_017007438
RefSeq Peptide - NP_001188513
RefSeq Peptide - NP_116752
RefSeq Peptide - NP_001188501
RefSeq Peptide - NP_004197
swissprot - C9J448
swissprot - C9J2R1
swissprot - A0A024R2Q1
swissprot - A0A024R2N5
swissprot - F8VQT7
swissprot - F8WBN1
swissprot - F8WDR5
swissprot - H7C479
swissprot - Q9BRL7
swissprot - C9JNW1
swissprot - C9J9A4
Ensembl - ENSG00000093183
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec22cENSDARG00000063387Danio rerio
 SEC22CENSGALG00000005268Gallus gallus
 Q8BXT9ENSMUSG00000061536Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96IW7 / SEC22A / SEC22 homolog A, vesicle trafficking proteinENSG0000012154241
O75396 / SEC22B / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)ENSG0000026580817


Protein motifs (from Interpro)
Interpro ID Name
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048280 vesicle fusion with Golgi apparatus IBA
 cellular_componentGO:0005783 endoplasmic reticulum TAS
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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