ENSG00000121542


Homo sapiens

Features
Gene ID: ENSG00000121542
  
Biological name :SEC22A
  
Synonyms : Q96IW7 / SEC22A / SEC22 homolog A, vesicle trafficking protein
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q21.1
Gene start: 123201927
Gene end: 123274130
  
Corresponding Affymetrix probe sets: 218703_at (Human Genome U133 Plus 2.0 Array)   238078_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000417200
Ensembl peptide - ENSP00000420574
Ensembl peptide - ENSP00000420343
Ensembl peptide - ENSP00000420128
Ensembl peptide - ENSP00000420015
Ensembl peptide - ENSP00000419039
Ensembl peptide - ENSP00000417972
Ensembl peptide - ENSP00000417219
Ensembl peptide - ENSP00000310521
NCBI entrez gene - 26984     See in Manteia.
OMIM - 612442
RefSeq - NM_012430
RefSeq - XM_011512673
RefSeq - XM_011512675
RefSeq - XM_011512676
RefSeq Peptide - NP_036562
swissprot - C9JZ27
swissprot - Q96IW7
swissprot - F8WAU7
swissprot - C9JRY4
swissprot - C9JR77
swissprot - C9JNZ0
swissprot - C9JDJ8
swissprot - C9J463
Ensembl - ENSG00000121542
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec22aENSDARG00000078328Danio rerio
 SEC22AENSGALG00000011697Gallus gallus
 Q8BH47ENSMUSG00000034473Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BRL7 / SEC22C / SEC22 homolog C, vesicle trafficking proteinENSG0000009318340
O75396 / SEC22B / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)ENSG0000026580822


Protein motifs (from Interpro)
Interpro ID Name
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily
 IPR027152  Vesicle-trafficking protein Sec22a


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048280 vesicle fusion with Golgi apparatus IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005215 transporter activity TAS
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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