ENSMUSG00000034473


Mus musculus

Features
Gene ID: ENSMUSG00000034473
  
Biological name :Sec22a
  
Synonyms : Q8BH47 / Sec22a / SEC22 homolog A, vesicle trafficking protein
  
Possible biological names infered from orthology : Q96IW7
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: B3
Gene start: 35311131
Gene end: 35363918
  
Corresponding Affymetrix probe sets: 10439208 (MoGene1.0st)   1416320_at (Mouse Genome 430 2.0 Array)   1444802_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000039568
NCBI entrez gene - 317717     See in Manteia.
MGI - MGI:2447876
RefSeq - XM_006522235
RefSeq - NM_133704
RefSeq - XM_006522234
RefSeq Peptide - NP_598465
swissprot - Q8BH47
swissprot - B2RSR2
Ensembl - ENSMUSG00000034473
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec22aENSDARG00000078328Danio rerio
 SEC22AENSGALG00000011697Gallus gallus
 Q96IW7ENSG00000121542Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BXT9 / Sec22c / Vesicle-trafficking protein SEC22c / Q9BRL7* / SEC22 homolog C, vesicle trafficking protein*ENSMUSG0000006153640
O08547 / Sec22b / Vesicle-trafficking protein SEC22b / O75396* / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)*ENSMUSG0000002787923


Protein motifs (from Interpro)
Interpro ID Name
 IPR010908  Longin domain
 IPR011012  Longin-like domain superfamily
 IPR027152  Vesicle-trafficking protein Sec22a


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048280 vesicle fusion with Golgi apparatus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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