ENSGALG00000005395


Gallus gallus

Features
Gene ID: ENSGALG00000005395
  
Biological name :POLR1E
  
Synonyms : POLR1E / RNA polymerase I subunit E
  
Possible biological names infered from orthology : polymerase (RNA) I polypeptide E / Q8K202 / Q9GZS1
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 81615349
Gene end: 81627915
  
Corresponding Affymetrix probe sets: Gga.1558.1.S1_at (Chicken Array)   GgaAffx.26489.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008649
Ensembl peptide - ENSGALP00000064112
Ensembl peptide - ENSGALP00000061339
NCBI entrez gene - 426805     See in Manteia.
RefSeq - XM_424416
swissprot - A0A1L1RZ31
swissprot - A0A1L1RRA1
swissprot - F1NXA7
Ensembl - ENSGALG00000005395
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polr1eENSDARG00000006434Danio rerio
 POLR1EENSG00000137054Homo sapiens
 Polr1eENSMUSG00000028318Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009668  RNA polymerase I associated factor, A49-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006360 transcription by RNA polymerase I IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005736 DNA-directed RNA polymerase I complex IEA
 molecular_functionGO:0001054 RNA polymerase I activity IBA
 molecular_functionGO:0001179 RNA polymerase I transcription factor binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
B-WICH complex positively regulates rRNA expression
RNA Polymerase I Transcription Initiation
RNA Polymerase I Promoter Escape
RNA Polymerase I Chain Elongation
RNA Polymerase I Transcription Termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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