ENSGALG00000005613


Gallus gallus

Features
Gene ID: ENSGALG00000005613
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 16808537
Gene end: 16814246
  
Corresponding Affymetrix probe sets: GgaAffx.3521.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008994
NCBI entrez gene - 423756     See in Manteia.
RefSeq - XM_421631
swissprot - E1C143
Ensembl - ENSGALG00000005613
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pitx3ENSDARG00000070069Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PITX2 / pituitary homeobox 2 / Q99697* / P97474* / paired like homeodomain 2* / paired-like homeodomain transcription factor 2*ENSGALG0000004249274
PITX1 / pituitary homeobox 1 / PITX3* / O35160* / P70314* / O75364* / P78337* / Pituitary homeobox 3 * / paired like homeodomain 1* / paired like homeodomain 3* / paired-like homeodomain t...ENSGALG0000003023763
DMBX1 / diencephalon/mesencephalon homeobox 1 / Q8NFW5* / Q91ZK4* / Diencephalon/mesencephalon homeobox protein 1 *ENSGALG0000001043627
PRRX1 / paired mesoderm homeobox protein 1 / P54821* / P63013* / paired related homeobox 1*ENSGALG0000000332424
PRRX2 / paired related homeobox 2 / Q99811*ENSGALG0000002823624
OTX1 / orthodenticle homeobox 1 / P32242* / P80205* / Homeobox protein OTX1 *ENSGALG0000002881722
OTX2 / orthodenticle homeobox 2 / P32243*ENSGALG0000003488922
GSC / homeobox protein goosecoid / P56915* / Q02591* / goosecoid homeobox*ENSGALG0000001097416
GSC2 / goosecoid homeobox 2 / O15499*ENSGALG0000004424515


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003654  OAR domain
 IPR009057  Homeobox-like domain superfamily
 IPR016233  Homeobox protein Pitx/unc30
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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