ENSGALG00000005678


Gallus gallus

Features
Gene ID: ENSGALG00000005678
  
Biological name :FLNB
  
Synonyms : filamin-B / FLNB
  
Possible biological names infered from orthology : O75369 / Q80X90
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 8853128
Gene end: 8931289
  
Corresponding Affymetrix probe sets: Gga.4581.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045421
Ensembl peptide - ENSGALP00000057717
Ensembl peptide - ENSGALP00000035478
NCBI entrez gene - 378913     See in Manteia.
RefSeq - XM_015292940
RefSeq - NM_001030341
RefSeq - XM_015292937
RefSeq - XM_015292938
RefSeq - XM_015292939
RefSeq Peptide - NP_001025512
swissprot - A0A1D5PXM1
swissprot - F1N8D4
swissprot - A0A1D5NYG3
Ensembl - ENSGALG00000005678
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FP325130.1ENSDARG00000112527Danio rerio
 FLNBENSG00000136068Homo sapiens
 FlnbENSMUSG00000025278Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYNE2 / spectrin repeat containing nuclear envelope protein 2 / Q6ZWQ0* / Q8WXH0* / spectrin repeat containing, nuclear envelope 2*ENSGALG0000001181114
SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuclear envelope 1 (Syne1), transcript variant 5, mRNA.*ENSGALG0000001350511
SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuclear envelope 1 (Syne1), transcript variant 5, mRNA.*ENSGALG000000426386
CLMN / calmin / Q8C5W0* / Q96JQ2*ENSGALG000000307194


Protein motifs (from Interpro)
Interpro ID Name
 IPR001298  Filamin/ABP280 repeat
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR017868  Filamin/ABP280 repeat-like
 IPR029874  Filamin-B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003334 keratinocyte development IEA
 biological_processGO:0003382 epithelial cell morphogenesis IEA
 biological_processGO:0007519 skeletal muscle tissue development IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 cellular_componentGO:0001725 stress fiber IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005903 brush border IEA
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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