ENSGALG00000030719


Gallus gallus

Features
Gene ID: ENSGALG00000030719
  
Biological name :CLMN
  
Synonyms : calmin / CLMN
  
Possible biological names infered from orthology : Q8C5W0 / Q96JQ2
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 45979330
Gene end: 45995515
  
Corresponding Affymetrix probe sets: GgaAffx.7012.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052805
NCBI entrez gene - 100858625     See in Manteia.
RefSeq - XM_015287775
swissprot - A0A1D5PJ15
Ensembl - ENSGALG00000030719
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clmnENSDARG00000096867Danio rerio
 zgc:100997ENSDARG00000043667Danio rerio
 CLMNENSG00000165959Homo sapiens
 ClmnENSMUSG00000021097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYNE2 / spectrin repeat containing nuclear envelope protein 2 / Q6ZWQ0* / Q8WXH0* / spectrin repeat containing, nuclear envelope 2*ENSGALG0000001181123
SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuclear envelope 1 (Syne1), transcript variant 5, mRNA.*ENSGALG0000004263819
FLNB / filamin-B / O75369* / Q80X90*ENSGALG0000000567816
SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuclear envelope 1 (Syne1), transcript variant 5, mRNA.*ENSGALG000000135058


Protein motifs (from Interpro)
Interpro ID Name
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0031175 neuron projection development IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr