ENSDARG00000043667


Danio rerio

Features
Gene ID: ENSDARG00000043667
  
Biological name :zgc:100997
  
Synonyms : zgc:100997
  
Possible biological names infered from orthology : calmin / CLMN / Q8C5W0 / Q96JQ2
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 10498704
Gene end: 10520821
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000064113
Ensembl peptide - ENSDARP00000154972
NCBI entrez gene - 445211     See in Manteia.
RefSeq - NM_001003605
RefSeq Peptide - NP_001003605
swissprot - F1RA97
ZFIN ID - ZDB-GENE-040801-124
Ensembl - ENSDARG00000043667
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLMNENSGALG00000030719Gallus gallus
 CLMNENSG00000165959Homo sapiens
 ClmnENSMUSG00000021097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syne1b / spectrin repeat containing, nuclear envelope 1b / SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuc...ENSDARG0000006306827
clmn / calmin / Q8C5W0* / Q96JQ2*ENSDARG0000009686727
syne1a / spectrin repeat containing, nuclear envelope 1a / SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuc...ENSDARG0000000949925
si:ch211-207i1.2 / SYNE2* / Q8WXH0* / Q6ZWQ0* / spectrin repeat containing, nuclear envelope 2* / spectrin repeat containing nuclear envelope protein 2*ENSDARG0000003010722
flnca / filamin C, gamma a (actin binding protein 280) / FLNC* / Q14315* / Q8VHX6* / filamin C*ENSDARG0000001856618
flncb / filamin C, gamma b (actin binding protein 280) / FLNC* / Q14315* / filamin C*ENSDARG0000001882017
flna / filamin A, alpha (actin binding protein 280) / P21333* / Q8BTM8* / filamin A*ENSDARG0000007420117
flnb / filamin B, beta (actin binding protein 278)ENSDARG0000009228115
CABZ01030862.1ENSDARG000000983749
si:ch211-137a8.2ENSDARG000000689265
zgc:165653ENSDARG000001047135
syne2b / spectrin repeat containing, nuclear envelope 2b / SYNE2* / Q8WXH0* / Q6ZWQ0* / spectrin repeat containing, nuclear envelope 2* / spectrin repeat containing nuclear envelope protein 2*ENSDARG000000534845
FP325130.1 / FLNB* / O75369* / filamin B*ENSDARG000001125271


Protein motifs (from Interpro)
Interpro ID Name
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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