ENSDARG00000074201


Danio rerio

Features
Gene ID: ENSDARG00000074201
  
Biological name :flna
  
Synonyms : filamin A, alpha (actin binding protein 280) / flna
  
Possible biological names infered from orthology : filamin A / P21333 / Q8BTM8
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 19759128
Gene end: 19809027
  
Corresponding Affymetrix probe sets: Dr.955.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116490
Ensembl peptide - ENSDARP00000113808
NCBI entrez gene - 562529     See in Manteia.
RefSeq - XM_009296771
RefSeq - XM_021473623
RefSeq - XM_021474523
RefSeq - XM_021474524
RefSeq - XM_009296770
RefSeq - XM_021473622
swissprot - F1R1U1
swissprot - E9QI62
ZFIN ID - ZDB-GENE-030131-2145
Ensembl - ENSDARG00000074201
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FLNAENSG00000196924Homo sapiens
 FlnaENSMUSG00000031328Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
flncb / filamin C, gamma b (actin binding protein 280) / FLNC* / Q14315* / filamin C*ENSDARG0000001882072
flnca / filamin C, gamma a (actin binding protein 280) / FLNC* / Q14315* / Q8VHX6* / filamin C*ENSDARG0000001856669
CABZ01030862.1ENSDARG0000009837438
flnb / filamin B, beta (actin binding protein 278)ENSDARG0000009228135
syne1b / spectrin repeat containing, nuclear envelope 1b / SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuc...ENSDARG0000006306817
syne1a / spectrin repeat containing, nuclear envelope 1a / SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuc...ENSDARG0000000949916
si:ch211-207i1.2 / SYNE2* / Q8WXH0* / Q6ZWQ0* / spectrin repeat containing, nuclear envelope 2* / spectrin repeat containing nuclear envelope protein 2*ENSDARG0000003010713
syne2b / spectrin repeat containing, nuclear envelope 2b / SYNE2* / Q8WXH0* / Q6ZWQ0* / spectrin repeat containing, nuclear envelope 2* / spectrin repeat containing nuclear envelope protein 2*ENSDARG000000534845
clmn / calmin / Q8C5W0* / Q96JQ2*ENSDARG000000968675
FP325130.1 / FLNB* / O75369* / filamin B*ENSDARG000001125274
zgc:100997 / CLMN* / calmin* / Q8C5W0* / Q96JQ2*ENSDARG000000436674
si:ch211-137a8.2ENSDARG000000689262
zgc:165653ENSDARG000001047131


Protein motifs (from Interpro)
Interpro ID Name
 IPR001298  Filamin/ABP280 repeat
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR017868  Filamin/ABP280 repeat-like
 IPR028559  Filamin A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Cell-extracellular matrix interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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