ENSDARG00000096867


Danio rerio

Features
Gene ID: ENSDARG00000096867
  
Biological name :clmn
  
Synonyms : calmin / clmn
  
Possible biological names infered from orthology : Q8C5W0 / Q96JQ2
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 15983247
Gene end: 16034453
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127965
Ensembl peptide - ENSDARP00000155530
swissprot - X1WCM1
ZFIN ID - ZDB-GENE-131127-546
Ensembl - ENSDARG00000096867
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLMNENSGALG00000030719Gallus gallus
 CLMNENSG00000165959Homo sapiens
 ClmnENSMUSG00000021097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syne1b / spectrin repeat containing, nuclear envelope 1b / SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuc...ENSDARG0000006306819
zgc:100997 / CLMN* / calmin* / Q8C5W0* / Q96JQ2*ENSDARG0000004366718
syne1a / spectrin repeat containing, nuclear envelope 1a / SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuc...ENSDARG0000000949918
si:ch211-207i1.2 / SYNE2* / Q8WXH0* / Q6ZWQ0* / spectrin repeat containing, nuclear envelope 2* / spectrin repeat containing nuclear envelope protein 2*ENSDARG0000003010717
flncb / filamin C, gamma b (actin binding protein 280) / FLNC* / Q14315* / filamin C*ENSDARG0000001882012
flna / filamin A, alpha (actin binding protein 280) / P21333* / Q8BTM8* / filamin A*ENSDARG0000007420112
flnca / filamin C, gamma a (actin binding protein 280) / FLNC* / Q14315* / Q8VHX6* / filamin C*ENSDARG0000001856612
flnb / filamin B, beta (actin binding protein 278)ENSDARG0000009228111
CABZ01030862.1ENSDARG000000983746
zgc:165653ENSDARG000001047134
si:ch211-137a8.2ENSDARG000000689263
syne2b / spectrin repeat containing, nuclear envelope 2b / SYNE2* / Q8WXH0* / Q6ZWQ0* / spectrin repeat containing, nuclear envelope 2* / spectrin repeat containing nuclear envelope protein 2*ENSDARG000000534843
FP325130.1 / FLNB* / O75369* / filamin B*ENSDARG000001125270


Protein motifs (from Interpro)
Interpro ID Name
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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