ENSDARG00000018566
Danio rerio | |
Features
| Gene ID: | ENSDARG00000018566 | | | | | Biological name : | flnca | | | | | Synonyms : | filamin C, gamma a (actin binding protein 280) / flnca | | | | | Possible biological names infered from orthology : | filamin C / FLNC / Q14315 / Q8VHX6 | | | | | Species: | Danio rerio | | | | | Chr. number: | 25 | | Strand: | 1 | | Band: | | | Gene start: | 35019693 | | Gene end: | 35041057 | | | | | Corresponding Affymetrix probe sets: | | | | | | Cross references: | Ensembl peptide - ENSDARP00000046217
Ensembl peptide - ENSDARP00000138996
NCBI entrez gene - 100048921
See in Manteia.
RefSeq - XM_002666936
RefSeq - XM_017354239
swissprot - E7F1L7
swissprot - A0A0R4IUS4
ZFIN ID - ZDB-GENE-070503-1
Ensembl - ENSDARG00000018566
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| flncb / filamin C, gamma b (actin binding protein 280) / FLNC* / Q14315* / filamin C* | ENSDARG00000018820 | 81 | | flna / filamin A, alpha (actin binding protein 280) / P21333* / Q8BTM8* / filamin A* | ENSDARG00000074201 | 65 | | CABZ01030862.1 | ENSDARG00000098374 | 37 | | flnb / filamin B, beta (actin binding protein 278) | ENSDARG00000092281 | 34 | | syne1b / spectrin repeat containing, nuclear envelope 1b / SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuc... | ENSDARG00000063068 | 16 | | syne1a / spectrin repeat containing, nuclear envelope 1a / SYNE1* / Q6ZWR6* / Q8NF91* / spectrin repeat containing nuclear envelope protein 1* / Mus musculus spectrin repeat containing, nuc... | ENSDARG00000009499 | 15 | | si:ch211-207i1.2 / SYNE2* / Q8WXH0* / Q6ZWQ0* / spectrin repeat containing, nuclear envelope 2* / spectrin repeat containing nuclear envelope protein 2* | ENSDARG00000030107 | 12 | | clmn / calmin / Q8C5W0* / Q96JQ2* | ENSDARG00000096867 | 5 | | syne2b / spectrin repeat containing, nuclear envelope 2b / SYNE2* / Q8WXH0* / Q6ZWQ0* / spectrin repeat containing, nuclear envelope 2* / spectrin repeat containing nuclear envelope protein 2* | ENSDARG00000053484 | 4 | | FP325130.1 / FLNB* / O75369* / filamin B* | ENSDARG00000112527 | 4 | | zgc:100997 / CLMN* / calmin* / Q8C5W0* / Q96JQ2* | ENSDARG00000043667 | 4 | | si:ch211-137a8.2 | ENSDARG00000068926 | 2 | | zgc:165653 | ENSDARG00000104713 | 1 |
Protein motifs (from Interpro)
Gene Ontology (GO)
Pathways (from Reactome)
Phenotype (from MGI, Zfin or HPO)
| ZFA:0001094 | whole organism | whole organism decreased mobility , abnormal |
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| | ZFA:0001462 | somite border | somite border myosin complex aggregated , abnormal
somite border mislocalised , abnormal |
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| | ZFA:0005784 | striated muscle cell | striated muscle cell mitochondrion infiltrative , abnormal
striated muscle cell muscle myosin complex accumulation myoseptum , abnormal |
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| | ZFA:0009115 | skeletal muscle cell | skeletal muscle cell spatial pattern , abnormal
skeletal muscle cell broken , abnormal |
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| | ZFA:0009116 | slow muscle cell | slow muscle cell broken , abnormal
slow muscle cell non-functional , abnormal
slow muscle cell actin filament irregular spatial pattern , abnormal
slow muscle cell myosin filament irregular spatial pattern , abnormal
slow muscle cell type III intermediate filament irregular spatial pattern , abnormal |
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| | ZFA:0009117 | fast muscle cell | fast muscle cell contractile fiber disassembled , abnormal |
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Interacting proteins (from Reactome)
| ENSDARG00000037746 | actb1 / Q7ZVI7 / actin, beta 1 / ACTB* / ACTG1* / POTEJ* / P60709* / P0CG39* / P60710* / P63260* / P63261* / actin beta* / actin gamma 1* / POTE ankyrin domain family member J* / Actin, cyt... | / reaction / complex | | ENSDARG00000037870 | actb2 / Q7ZVF9 / actin, beta 2 / ACTB* / ACTG1* / POTEJ* / P60709* / P0CG39* / P60710* / P63260* / P63261* / actin beta* / actin gamma 1* / POTE ankyrin domain family member J* / Actin, cyt... | / reaction / complex |
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