ENSMUSG00000021097


Mus musculus

Features
Gene ID: ENSMUSG00000021097
  
Biological name :Clmn
  
Synonyms : Calmin / Clmn / Q8C5W0
  
Possible biological names infered from orthology : Q96JQ2
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: E
Gene start: 104763117
Gene end: 104865076
  
Corresponding Affymetrix probe sets: 10402473 (MoGene1.0st)   1425321_a_at (Mouse Genome 430 2.0 Array)   1429166_s_at (Mouse Genome 430 2.0 Array)   1436539_at (Mouse Genome 430 2.0 Array)   1439117_at (Mouse Genome 430 2.0 Array)   1451656_at (Mouse Genome 430 2.0 Array)   1457985_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152228
Ensembl peptide - ENSMUSP00000152467
Ensembl peptide - ENSMUSP00000105562
Ensembl peptide - ENSMUSP00000105563
Ensembl peptide - ENSMUSP00000152070
Ensembl peptide - ENSMUSP00000152097
NCBI entrez gene - 94040     See in Manteia.
MGI - MGI:2136957
RefSeq - NM_001040682
RefSeq - NM_053155
RefSeq Peptide - NP_001035772
RefSeq Peptide - NP_444385
swissprot - A0A1Y7VNK2
swissprot - Q8C5W0
Ensembl - ENSMUSG00000021097
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clmnENSDARG00000096867Danio rerio
 zgc:100997ENSDARG00000043667Danio rerio
 CLMNENSGALG00000030719Gallus gallus
 CLMNENSG00000165959Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Syne2 / Q6ZWQ0 / spectrin repeat containing, nuclear envelope 2 / Q8WXH0* / spectrin repeat containing nuclear envelope protein 2*ENSMUSG0000006345026
Flna / Q8BTM8 / Filamin-A / P21333*ENSMUSG0000003132817
Flnc / Q8VHX6 / Filamin-C / Q14315*ENSMUSG0000006869916
Flnb / Q80X90 / Filamin-B / O75369*ENSMUSG0000002527816
Syne1 / Q6ZWR6 / Mus musculus spectrin repeat containing, nuclear envelope 1 (Syne1), transcript variant 5, mRNA. / Q8NF91* / spectrin repeat containing nuclear envelope protein 1*ENSMUSG0000009605415


Protein motifs (from Interpro)
Interpro ID Name
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008285 negative regulation of cell proliferation IDA
 biological_processGO:0031175 neuron projection development IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane ISS
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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