ENSG00000136068


Homo sapiens

Features
Gene ID: ENSG00000136068
  
Biological name :FLNB
  
Synonyms : filamin B / FLNB / O75369
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p14.3
Gene start: 58008400
Gene end: 58172251
  
Corresponding Affymetrix probe sets: 208613_s_at (Human Genome U133 Plus 2.0 Array)   208614_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000415599
Ensembl peptide - ENSP00000420213
Ensembl peptide - ENSP00000420199
Ensembl peptide - ENSP00000419954
Ensembl peptide - ENSP00000418510
Ensembl peptide - ENSP00000295956
Ensembl peptide - ENSP00000351339
Ensembl peptide - ENSP00000414532
NCBI entrez gene - 2317     See in Manteia.
OMIM - 603381
RefSeq - XM_005264978
RefSeq - NM_001164317
RefSeq - NM_001164318
RefSeq - NM_001164319
RefSeq - NM_001457
RefSeq Peptide - NP_001157791
RefSeq Peptide - NP_001157789
RefSeq Peptide - NP_001157790
RefSeq Peptide - NP_001448
swissprot - H7C5L4
swissprot - A0A0A0MT44
swissprot - O75369
swissprot - E7EN95
swissprot - A0A0C4DGA1
Ensembl - ENSG00000136068
  
Related genetic diseases (OMIM): 108720 - Atelosteogenesis, type I, 108720
  108721 - Atelosteogenesis, type III, 108721
  112310 - Boomerang dysplasia, 112310
  150250 - Larsen syndrome, 150250
  272460 - Spondylocarpotarsal synostosis syndrome, 272460
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FP325130.1ENSDARG00000112527Danio rerio
 FLNBENSGALG00000005678Gallus gallus
 FlnbENSMUSG00000025278Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FLNC / Q14315 / filamin CENSG0000012859170
FLNA / P21333 / filamin AENSG0000019692469
SYNE1 / Q8NF91 / spectrin repeat containing nuclear envelope protein 1ENSG0000013101818
SYNE2 / Q8WXH0 / spectrin repeat containing nuclear envelope protein 2ENSG0000005465416
CLMN / calmin / Q96JQ2ENSG000001659596


Protein motifs (from Interpro)
Interpro ID Name
 IPR001298  Filamin/ABP280 repeat
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR017868  Filamin/ABP280 repeat-like
 IPR029874  Filamin-B
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003334 keratinocyte development IEA
 biological_processGO:0003382 epithelial cell morphogenesis IEA
 biological_processGO:0007016 cytoskeletal anchoring at plasma membrane TAS
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0007519 skeletal muscle tissue development IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 cellular_componentGO:0001725 stress fiber IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005903 brush border IEA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0005938 cell cortex IEA
 cellular_componentGO:0015629 actin cytoskeleton TAS
 cellular_componentGO:0016021 integral component of membrane NAS
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
ISG15 antiviral mechanism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000107 Renal cysts 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000269 Prominent occiput 
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000283 Broad face 
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 HP:0000316 Hypertelorism 
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 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000384 Preauricular skin tag "A rudimentary tag of ear tissue often containing a core of cartilage and located just in front of the auricle (outer part of the ear)." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000410 Mixed hearing loss 
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000455 Broad nasal tip 
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 HP:0000470 Short neck 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000520 Proptosis 
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 HP:0000586 Shallow orbits 
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 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0000774 Narrow chest 
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 HP:0000824 Growth hormone deficiency "Insufficient production of growth hormone, which is produced by the anterior pituitary gland." [HPO:curators]
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 HP:0000878 11 pairs of ribs 
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 HP:0001156 Brachydactyly 
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 HP:0001163 Abnormality of the metacarpal bones 
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 HP:0001217 Clubbing "Non-edematous swelling/broadening of the soft tissue of the fingertips in all dimensions." [HPO:curators]
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 HP:0001222 Spatulate thumbs "Spoon-shaped, broad thumbs." [HPO:curators]
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 HP:0001234 Hitchhiker thumb "The condition known as "hitchhiker s thumb" means, that the distal phalanx of the thumb, when the thumb is extended (as in a "thumbs-up"), can extend backwards toward the nail and outwards at an angle of up to, or more than, 90 degrees from the thumb, whereas normally it will extend straight out with little backward bending." [HPO:curators]
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 HP:0001241 Capitate-hamate fusion 
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 HP:0001249 Mental retardation 
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 HP:0001363 Craniosynostosis "Craniosynostosis refers to the premature closure of the cranial sutures. Primary craniosynostosis refers to the closure of one or more sutures due to abnormalities in skull development, and secondary craniosynostosis results from failure of brain growth." [HPO:curators]
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 HP:0001388 Joint laxity 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001539 Omphalocele 
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 HP:0001561 Polyhydramnios 
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 HP:0001602 Laryngeal stenosis 
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 HP:0001622 Premature birth 
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 HP:0001626 Abnormality of the cardiovascular system "Any abnormality of the heart or vasculature." [HPO:curators]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001772 Talipes equinovalgus 
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 HP:0001789 Hydrops fetalis 
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 HP:0001799 Short nails 
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 HP:0001852 Gap between first and second toes "The presence of a larger than normal gap between the first and second toes related to medial displacement of the first toe." [HPO:curators]
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002084 Encephalocele 
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 HP:0002091 Restrictive lung disease 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002176 Spinal cord compression 
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 HP:0002644 Abnormality of the pelvis "An abnormality of the bony pelvis (pelvic girdle); which is a ring of bones connecting the vertebral column to the femurs." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002656 Epiphyseal dysplasia 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002777 Tracheal stenosis 
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 HP:0002779 Tracheomalacia 
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 HP:0002780 Bronchomalacia 
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 HP:0002818 Abnormality of the radius 
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 HP:0002823 Abnormality of the femur "Abnormality of the femur (i.e., the thigh bone)." [HPO:curators]
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 HP:0002827 Dislocated hips 
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 HP:0002947 Cervical kyphosis 
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 HP:0002949 Fused cervical vertebrae 
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 HP:0002982 Tibial bowing "A developmental defect with posteromedial tibial angulation." [HPO:curators]
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 HP:0002983 Micromelia 
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 HP:0002986 Radial bowing 
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 HP:0002990 Fibular aplasia "Absence of the fibula." [HPO:curators]
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 HP:0002992 Abnormality of the tibia "Abnormality of the tibia (shinbone)." [HPO:curators]
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 HP:0002997 Abnormality of the ulna "Ab abnormality of the ulna bone of the forearm." [HPO:curators]
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 HP:0003042 Elbow dislocation "A dislocation affecting the elbow joint, where the radius, ulna, and humerus meet." [HPO:curators]
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 HP:0003063 Abnormality of the humerus "An abnormality of the humerus (i.e., upper arm bone)." [HPO:curators]
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 HP:0003097 Short femur "An abnormal shortening of the thigh bones." [HPO:curators]
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 HP:0003180 Flat acetabular roofs 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003298 Spina bifida occulta "The closed form of spina bifida." [HPO:curators]
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 HP:0003304 Spondylolysis 
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 HP:0003305 Block vertebrae 
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 HP:0003307 Hyperlordosis 
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 HP:0003311 Hypoplastic odontoid process 
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 HP:0003319 Abnormality of the cervical spine "Any abnormality of the cervical vertebral bodies." [HPO:curators]
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 HP:0003417 Coronal cleft vertebrae 
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 HP:0003422 Vertebral segmentation defects 
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 HP:0003440 Horizontal sacrum 
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0003521 Short stature, disproportionate (short trunk) 
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 HP:0003745 Sporadic 
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 HP:0003811 Neonatal death 
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 HP:0003826 Stillborn or neonatal death 
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 HP:0003974 Absent ossification/absence of radius 
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 HP:0003994 Dislocated wrist 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004232 Accessory carpal bones "The presence of more than the normal number of carpal bones." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004568 Beaking of vertebral bodies 
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 HP:0004592 thoracic platyspondyly 
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 HP:0004632 cervical segmentation defects 
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 HP:0004942 Aortic aneurysms 
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 HP:0004976 Dislocations of the knees 
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 HP:0005008 Large joint dislocations 
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 HP:0005104 Hypoplastic nasal septum "Underdevelopment of the nasal septum." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005692 Joint hyperflexibility 
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 HP:0005792 Humeral hypoplasia 
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0006060 Tombstone-shaped proximal phalanges 
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 HP:0006067 Multiple carpal ossification centers 
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006200 Widened distal phalanges 
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 HP:0006297 Hypoplastic dental enamel 
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 HP:0006406 Club-shaped proximal femurs 
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 HP:0006408 Short femora with proximal clubbing and distal tapering 
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 HP:0006492 Aplasia/Hypoplasia of the fibula "Absence or underdevelopment of the fibula." [HPO:curators]
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 HP:0006495 Aplasia/Hypoplasia of the ulna "Absence or underdevelopment of the ulna." [HPO:curators]
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 HP:0006703 Aplasia/Hypoplasia of the lungs 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0007957 Variable degree of corneal opacities 
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 HP:0008127 Bipartite calcaneus "Bipartite calcaneus is a rarely observed radiographic finding that probably results from delayed coalescence of two primary calcaneal centers of ossification." [HPO:curators]
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 HP:0008368 Synostosis involving tarsal bones 
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 HP:0008434 Hypoplastic cervical vertebrae 
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 HP:0008456 C2-C3 subluxation "A partial dislocation of the intervertebral joint between the second and third cervical vertebrae." [HPO:curators]
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 HP:0008755 Laryngotracheomalacia 
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 HP:0008824 Hypoplastic iliac body 
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 HP:0008890 Severe short-limb dwarfism 
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 HP:0008905 Rhizomelic short stature 
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 HP:0009702 Synostosis involving the carpal bones 
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 HP:0009836 Broad distal phalanges of the hand "Abnormally wide (broad) distal phalanges of the fingers." [HPO:curators]
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 HP:0009882 Hypoplasia of the distal phalanges of the hand 
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0010318 Aplasia/Hypoplasia of the abdominal wall musculature "Absence or underdevelopment of the abdominal wall musculature." [HPO:curators]
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 HP:0010743 Hypoplasia of the metatarsal bones 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0011304 Broad thumb "Increased thumb width without increased dorso-ventral dimension." [pmid:19125433]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
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 HP:0030330 Multinucleated giant chondrocytes in epiphyseal cartilage "The presence of cartilage cells (chondrocytes) that are substantially increased in size and contain more than one nucleus and are located within the resting zone of the epiphyseal cartilage." [HPO:probinson]
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 HP:0100856 Poorly ossified vertebrae "Decreased `ossification` ( GO:0001503) of the `vertebral bodies` (FMA:11945)." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000138646 HERC5 / Q9UII4 / HECT and RLD domain containing E3 ubiquitin protein ligase 5  / reaction
 ENSG00000187608 ISG15 / P05161 / ISG15 ubiquitin-like modifier  / complex / reaction
 ENSG00000156587 O14933 / UBE2L6 / ubiquitin conjugating enzyme E2 L6  / reaction
 ENSG00000166233 ARIH1 / Q9Y4X5 / ariadne RBR E3 ubiquitin protein ligase 1  / reaction






 

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