ENSGALG00000005787


Gallus gallus

Features
Gene ID: ENSGALG00000005787
  
Biological name :ZNF143
  
Synonyms : zinc finger protein 143 / ZNF143
  
Possible biological names infered from orthology : O70230 / P52747 / Zfp143
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 9330568
Gene end: 9350333
  
Corresponding Affymetrix probe sets: Gga.19513.1.S1_s_at (Chicken Array)   GgaAffx.26607.4.S1_at (Chicken Array)   GgaAffx.26607.5.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009283
NCBI entrez gene - 428845     See in Manteia.
RefSeq - XM_015286462
RefSeq - XM_015286463
RefSeq - XM_015286465
RefSeq - XM_015286466
RefSeq - XM_015286467
RefSeq - XM_426401
RefSeq - XM_015286461
swissprot - E1C5B8
Ensembl - ENSGALG00000005787
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q1LYE3ENSDARG00000041581Danio rerio
 znf143aENSDARG00000012887Danio rerio
 P52747ENSG00000166478Homo sapiens
 O70230ENSMUSG00000061079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZNF76 / zinc finger protein 76 / Zfp523* / P36508* / Q8BMU0* / zinc finger protein 523*ENSGALG0000000263042
MTF1 / metal regulatory transcription factor 1 / Q07243* / Q14872*ENSGALG0000000163922
ZXDC / ZXD family zinc finger C / Q2QGD7* / Q8C8V1*ENSGALG0000003048720
ZNF410 / zinc finger protein 410 / Q86VK4* / Q8BKX7* / Zfp410*ENSGALG0000001019314
GTF3A / transcription factor IIIA / Q92664* / general transcription factor IIIA*ENSGALG0000001709813
YY2 / transcriptional repressor protein YY1 / YY1* / Q00899* / P25490* / YY1 transcription factor*ENSGALG0000001738811


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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