ENSGALG00000017388


Gallus gallus

Features
Gene ID: ENSGALG00000017388
  
Biological name :YY2
  
Synonyms : transcriptional repressor protein YY1 / YY2
  
Possible biological names infered from orthology : P25490 / Q00899 / YY1 / YY1 transcription factor
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 48586244
Gene end: 48609222
  
Corresponding Affymetrix probe sets: Gga.18544.1.A1_at (Chicken Array)   Gga.18544.1.S1_at (Chicken Array)   Gga.4773.1.S1_at (Chicken Array)   Gga.4773.2.S1_s_at (Chicken Array)   GgaAffx.11452.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000028022
NCBI entrez gene - 423455     See in Manteia.
RefSeq - NM_001031210
RefSeq Peptide - NP_001026381
swissprot - F1NHV6
Ensembl - ENSGALG00000017388
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 yy1aENSDARG00000042796Danio rerio
 yy1bENSDARG00000027978Danio rerio
 YY1ENSG00000100811Homo sapiens
 Yy1ENSMUSG00000021264Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZNF143 / zinc finger protein 143 / O70230* / P52747* / Zfp143*ENSGALG0000000578716
MTF1 / metal regulatory transcription factor 1 / Q07243* / Q14872*ENSGALG0000000163915
GTF3A / transcription factor IIIA / Q92664* / general transcription factor IIIA*ENSGALG0000001709814
ZNF410 / zinc finger protein 410 / Q86VK4* / Q8BKX7* / Zfp410*ENSGALG0000001019314
ZXDC / ZXD family zinc finger C / Q2QGD7* / Q8C8V1*ENSGALG0000003048714
ZNF76 / zinc finger protein 76 / Zfp523* / P36508* / Q8BMU0* / zinc finger protein 523*ENSGALG0000000263014


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR017114  C2H2-type Zinc finger protein, YY-1-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006403 RNA localization IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0010225 response to UV-C IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0032688 negative regulation of interferon-beta production IEA
 biological_processGO:0034644 cellular response to UV IEA
 biological_processGO:0048593 camera-type eye morphogenesis IEA
 biological_processGO:0051276 chromosome organization IEA
 biological_processGO:1902894 negative regulation of pri-miRNA transcription by RNA polymerase II IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0031011 Ino80 complex IEA
 cellular_componentGO:0031519 PcG protein complex IEA
 molecular_functionGO:0000400 four-way junction DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000987 proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001158 enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA
 molecular_functionGO:0046332 SMAD binding IEA


Pathways (from Reactome)
Pathway description
UCH proteinases
DNA Damage Recognition in GG-NER
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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