ENSGALG00000005820


Gallus gallus

Features
Gene ID: ENSGALG00000005820
  
Biological name :RNF130
  
Synonyms : ring finger protein 130 / RNF130
  
Possible biological names infered from orthology : Q86XS8 / Q8VEM1
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 13397472
Gene end: 13434489
  
Corresponding Affymetrix probe sets: Gga.1046.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009335
Ensembl peptide - ENSGALP00000051957
Ensembl peptide - ENSGALP00000045370
NCBI entrez gene - 416281     See in Manteia.
RefSeq - XM_015293933
RefSeq - XM_015293934
RefSeq - XM_414601
swissprot - E1C3B7
swissprot - A0A1D5PGN4
swissprot - A0A1D5NYB3
Ensembl - ENSGALG00000005820
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf130ENSDARG00000089767Danio rerio
 Q86XS8ENSG00000113269Homo sapiens
 Q8VEM1ENSMUSG00000020376Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF150 / ring finger protein 150 / Q5DTZ6* / Q9ULK6*ENSGALG0000000986547
RNF149 / ring finger protein 149 / Q3U2C5* / Q8NC42* / E3 ubiquitin-protein ligase RNF149 *ENSGALG0000001677934
RNF148* / Q8TEB7* / Q8WVZ7* / Q9D304* / RNF128* / RNF133* / G3X9R7* / Q14B02* / Q8N7C7* / ring finger protein 148* / ring finger protein 133* / E3 ubiquitin-protein ligase RNF133 * / E3 ubi...ENSGALG0000004197731
RNF13 / Q90972 / E3 ubiquitin-protein ligase RNF13 / O54965* / O43567* / ring finger protein 13*ENSGALG0000001041118
RNF43 / ring finger protein 43 / Q5NCP0* / Q68DV7* / E3 ubiquitin-protein ligase RNF43 *ENSGALG0000000102816
ZNRF4* / Q8WWF5* / Q9DAH2* / zinc and ring finger 4*ENSGALG0000003816414
ZNRF3* / Q5SSZ7* / Q9ULT6* / zinc and ring finger 3*ENSGALG0000000580312
RNF215 / ring finger protein 215 / Q5SPX3* / Q9Y6U7*ENSGALG0000004092511
ZNRF3* / Q5SSZ7* / Q9ULT6* / zinc and ring finger 3*ENSGALG000000388613


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003137  PA domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0012501 programmed cell death IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr