ENSG00000113269


Homo sapiens

Features
Gene ID: ENSG00000113269
  
Biological name :RNF130
  
Synonyms : Q86XS8 / ring finger protein 130 / RNF130
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q35.3
Gene start: 179911651
Gene end: 180072118
  
Corresponding Affymetrix probe sets: 1559537_at (Human Genome U133 Plus 2.0 Array)   1563975_at (Human Genome U133 Plus 2.0 Array)   217865_at (Human Genome U133 Plus 2.0 Array)   222058_at (Human Genome U133 Plus 2.0 Array)   230932_at (Human Genome U133 Plus 2.0 Array)   232192_at (Human Genome U133 Plus 2.0 Array)   236292_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429509
Ensembl peptide - ENSP00000430999
Ensembl peptide - ENSP00000430237
Ensembl peptide - ENSP00000261947
NCBI entrez gene - 55819     See in Manteia.
RefSeq - NM_018434
RefSeq - XM_011534593
RefSeq - NM_001280801
RefSeq Peptide - NP_001267730
RefSeq Peptide - NP_060904
swissprot - A0A0C4DGE2
swissprot - Q86XS8
swissprot - E5RI87
Ensembl - ENSG00000113269
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf130ENSDARG00000089767Danio rerio
 RNF130ENSGALG00000005820Gallus gallus
 Q8VEM1ENSMUSG00000020376Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9ULK6 / RNF150 / ring finger protein 150ENSG0000017015349
Q8NC42 / RNF149 / ring finger protein 149ENSG0000016316235
Q8TEB7 / RNF128 / ring finger protein 128, E3 ubiquitin protein ligaseENSG0000013313533
Q8N7C7 / RNF148 / ring finger protein 148ENSG0000023563125
Q8WVZ7 / RNF133 / ring finger protein 133ENSG0000018805025
Q9H6Y7 / RNF167 / ring finger protein 167ENSG0000010852318
RNF13 / O43567 / ring finger protein 13ENSG0000008299618
RNF43 / Q68DV7 / ring finger protein 43ENSG0000010837517
ZNRF3 / Q9ULT6 / zinc and ring finger 3ENSG0000018357916
ZNRF4 / Q8WWF5 / zinc and ring finger 4ENSG0000010542815
Q9Y6U7 / RNF215 / ring finger protein 215ENSG0000009999912


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003137  PA domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0012501 programmed cell death ISS
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr