ENSGALG00000006080


Gallus gallus

Features
Gene ID: ENSGALG00000006080
  
Biological name :GPC4
  
Synonyms : glypican 4 / GPC4
  
Possible biological names infered from orthology : O75487 / P51655
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 3791474
Gene end: 3853513
  
Corresponding Affymetrix probe sets: GgaAffx.3789.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009798
Ensembl peptide - ENSGALP00000053346
Ensembl peptide - ENSGALP00000046715
NCBI entrez gene - 422234     See in Manteia.
RefSeq - XM_015278449
swissprot - A0A1D5PKI8
swissprot - A0A1D5P221
swissprot - F1NAU1
Ensembl - ENSGALG00000006080
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpc4ENSDARG00000015472Danio rerio
 GPC4ENSG00000076716Homo sapiens
 Gpc4ENSMUSG00000031119Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GPC6 / glypican 6 / Q9R087* / Q9Y625*ENSGALG0000001690045
GPC1 / glypican 1 / P35052* / Q9QZF2*ENSGALG0000004031633
GPC3 / glypican 3 / P51654* / Q8CFZ4*ENSGALG0000000608719
GPC5 / glypican 5 / P78333* / Q8CAL5*ENSGALG0000001690218
ENSGALG0000000672415


Protein motifs (from Interpro)
Interpro ID Name
 IPR001863  Glypican
 IPR019803  Glypican, conserved site
 IPR031180  Glypican-4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009966 regulation of signal transduction IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0046658 anchored component of plasma membrane IEA
 molecular_functionGO:0043395 heparan sulfate proteoglycan binding IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis
HS-GAG biosynthesis
HS-GAG degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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